RetrogeneDB ID:
retro_mputfur_421
Organism:
Location:
GL896908.1:11047754-11048035 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
71.58 %
Coverage:
59.87 %
Frameshifts:
1
Stop codons:
2


Parental gene:
Parental gene symbol:
PIGP
Parental gene aliases:
No gene alias available
Parental gene description:
phosphatidylinositol glycan anchor biosynthesis, class P [Source:HGNC Symbol;Acc:3046]

Genomic region (view in browser)





>retro_mputfur_421
TTCAAGGACCCAAGACTGTCTAAAGCCAAAGGAAAATGGTGGAAAATTTACTGTTCCCAT
TGCCACAAAGAGTAATTTATGGCTTTGTTCATTTCTTAAGCTCCCAGTCTGGCTTCATAC
TACATTTTGTGTGGGCTTTTATTCCTGAATCTTGGCTAACCTCCTTAGGCTAACCCTATT
GGCCTTAAAAATATAGGGCAGTTGCATTGCCTTTCTTTCTCCTCATTACTGTAGTGACTG
GTTATTTACCTTTATTTGGAATAAATGTAATGAGTACCTCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
FLSRRLSKATGK-MVENSPSPLPERAIYGFVLFLSSQFGFLLYLVWAFIPESWLHSLGLTYWPQKYWAVALPVYLLITIVIGYVLLFGINMMSTS
F...RLSKA.GK.MVEN...PLP.R.IYGFV.FLSSQ.GF.L..VWAFIPESWL.SLG..YWP.KY.AVALP..LLIT.V.GY..LFGIN.MSTS
Retrocopy
FKDPRLSKAKGK/MVENLLFPLPQRVIYGFVHFLSSQSGFILHFVWAFIPESWLTSLG*PYWP*KYRAVALPFFLLITVVTGYLPLFGINVMSTS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide