RetrogeneDB ID:
retro_mputfur_423
Organism:
Location:
GL896908.1:11712536-11713050 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
61.02 %
Coverage:
62.72 %
Frameshifts:
2
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_423
GTCAGTGTTCTATCATCCAGGAACCCTGGCGGGCGAGCTGGGCTGATGTCTGCTGCTGCT
ACTCGAGCCATTCCTGTTGCCGGCTGCTTCACTCCCAGAGCTTCTGCTAACCAGATTCAG
GCAGGCTTCTGGGAGCTGAGACTTCTGATAGCTATTAAAGCCAGGCAGACCACCAGCCTG
TCACAGAGGCATCTTATGAGTCTACTATCACTCTGTGTAACACAGGCTCTCCTCTGTGCT
ATGTGGACACTGCCATCCCTTGCAACAACAATGGAGCTCGCTCAGTGGGTCTGATGTGGT
GATCCTGGACGGGGATGCTCTGCGCCTGTGTGGCACCATTTCCTGTGAACACCCATAGGT
GGTCACCTCCGATCTCTACTTTGACAGAGATCCTGAAGGGATTGAAAAGGAAGAGCACAC
ATGCTCAAAAGGCTGTGACCCAGGGGGAATTATAGGGTGGATGACTGCTCCAGCTCCTGA
GTTCACTGTTACTCCACCTAAGGTCCCAGACTGG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
VSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPR-ADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVG
VSV.SSRN.G.RA.L..AAAT.A.P.AG.FTP....NQIQA.F.E.RLL.....R.ADHQP.TEASY....TI.LCNT.SPL.YVD.AIPCNN.GA.SVG
Retrocopy
VSVLSSRNPGGRAGLMSAAATRAIPVAGCFTPRASANQIQAGFWELRLLIAIKAR/ADHQPVTEASYES--TITLCNTGSPLCYVDTAIPCNNNGARSVG


Parental protein
LMW-WMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADW
LMW...L....LR..GTIS.EHP..V..DLYF.RDPE.IEKEE.....K........G..TAPAPEFT.T.P.V.DW
Retrocopy
LMW/VILDGDALRLCGTISCEHP*VVTSDLYFDRDPEGIEKEEHTCS-KGCDPGGIIGWMTAPAPEFTVTPPKVPDW


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide