RetrogeneDB ID:
retro_mputfur_424
Organism:
Location:
GL896908.1:16345777-16346132 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
71.07 %
Coverage:
100.0 %
Frameshifts:
3
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_424
GCTTTTAAAGACATGGGGAAGACACCCGTGGAACCAGAGGCGGGTGATTCCTTGAAATAG
AATTACTCTCAATGGCTGCAACGTAAATCTTTCGAAAAGCTAAGTACTGACTTGATCAGA
GGCACAAAGGAAAAGAATTCTCAGAGTGAAAGGACCAGTTCAGATGCCCACCAAGAGTCT
GAAAATCACTACAAGAAAAACTCATCATGGTGAAAGTTCCAAGACTTGAGATCGTCTTCA
GATGAGGATCCACAAGAGACCCATGGATTCGCACAGTCCTTCTGAGACGGTTAAACAGGT
GACTTCCATCAGTACTGGGCCAGGAGTTGAGGCTGAAGCCACCATTGCAGATGCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
AFKDTGKTPVEPEVA-IHRIRITLTSRNV-KSLEKVCADLIRGAKEKN-LKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIV
AFKD.GKTPVEPE...I...RITL...NV.KS.EK...DLIRG.KEKN.L.VKGPV.MPTK.L.ITTRKT..GE.SKT.DR.QMRIHKR..D.HSPSE.V
Retrocopy
AFKDMGKTPVEPEAG\IP*NRITLNGCNV/KSFEKLSTDLIRGTKEKN\LRVKGPVQMPTKSLKITTRKTHHGESSKT*DRLQMRIHKRPMDSHSPSETV


Parental protein
KQITSISIEPGVEVEVTIADA
KQ.TSIS..PGVE.E.TIADA
Retrocopy
KQVTSISTGPGVEAEATIADA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide