RetrogeneDB ID:
retro_mputfur_43
Organism:
Location:
GL896904.1:24025171-24025564 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
97.69 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
RPS15A
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S15a [Source:HGNC Symbol;Acc:10389]

Genomic region (view in browser)





>retro_mputfur_43
ATGGTGTGCATGAATGTCCTGGCAGATGCTCTCAAGAGCATCAACAATGCTGAAAAGAGA
GGCAAACGCCAGGTTCTTATTAGGCCGTGCTCCAAAGTCATCGTCCGGTTTCTCACTGTG
ATGATGAAGCACGGTTACATTGGCGAATTTGAAATTATTGATGATCACAGAGCGGGGAAG
ATTGTTGTGAACTTCACAGGCAGGTTGAACAGGTGTGGAGTGATCAGCCCCAGATTTGAT
GTACAACTGAAAGATCTAGAAAAATGGCAGAATAACTTGCTCCCGTCCCGCCAGTTTGGT
TTCATTGTACTGACAACTTCAGCTGGCATCATGGACCATGAAGAAGCAAGACGAAAACAC
ACAGGAGGGAAAATCCTGGGATTCTTTTTCTAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFG
MV.MNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVN.TGRLN.CGVISPRFDVQLKDLEKWQNNLLPSRQFG
Retrocopy
MVCMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNFTGRLNRCGVISPRFDVQLKDLEKWQNNLLPSRQFG


Parental protein
FIVLTTSAGIMDHEEARRKHTGGKILGFFF
FIVLTTSAGIMDHEEARRKHTGGKILGFFF
Retrocopy
FIVLTTSAGIMDHEEARRKHTGGKILGFFF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide