RetrogeneDB ID:
retro_mputfur_446
Organism:
Location:
GL896910.1:17914406-17914786 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
80.47 %
Coverage:
54.27 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
DRAM2
Parental gene aliases:
No gene alias available
Parental gene description:
DNA-damage regulated autophagy modulator 2 [Source:HGNC Symbol;Acc:28769]

Genomic region (view in browser)





>retro_mputfur_446
GCTGACCCTGCTCTGCCTTATATCAGTGACACTGGTTCAGTAGCTCCAGAAAAATGCTTG
TTTGGGGCAATGTTAAATACTGCCGCAGTTTTGTGCATTGCAACCATTTATGTTCATTAC
AAGCAAGTTCATGCCCTGAATCCTGAAGAGAGTCATATCATCAAATTAATTGAGGCTGGT
CTTGTACTTGGCTTACTGAGCTGTTTTGGACTTTCTGTTGTGGCACACTTCCAGACAACA
GCCTTATTCCTGTACATGTATGTGGAGCTGTGCTCACCTTTCGTATTAGCTCGTTACACA
TGTTCGTTCAGACTATCCTTTCCTACCAAATGCAGCTCAAAATTGGCGGCAAACAAGTCT
TCTGGATCAGACGACTGGTG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SNTALMYPGDTGTVAPEKCLFGAMLNIAAVLCIATIYVRYKQVHALNPEESRIIKLNKAGLVLGLLSCFGLTVVANFQKTAFFI-VHVCGAVLTFGMGSL
...AL.Y..DTG.VAPEKCLFGAMLN.AAVLCIATIYV.YKQVHALNPEES.IIKL..AGLVLGLLSCFGL.VVA.FQ.TA.F..VHVCGAVLTF...SL
Retrocopy
ADPALPYISDTGSVAPEKCLFGAMLNTAAVLCIATIYVHYKQVHALNPEESHIIKLIEAGLVLGLLSCFGLSVVAHFQTTALFL/VHVCGAVLTFRISSL


Parental protein
YMFVQTILSYQMQPKIHGKQVFWIRLLV
.MFVQTILSYQMQ.KI.GKQVFWIR.LV
Retrocopy
HMFVQTILSYQMQLKIGGKQVFWIRRLV


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide