RetrogeneDB ID:
retro_mputfur_448
Organism:
Location:
GL896910.1:3907790-3908056 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
76.67 %
Coverage:
68.46 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
RPS15A
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S15a [Source:HGNC Symbol;Acc:10389]

Genomic region (view in browser)





>retro_mputfur_448
ATGATGAAACTTGGTTACATTGGCAAAGCTGAAATCACGAATGACAACAGAGCTGGGAAA
ATTGTGGTGAACCTCATGGGCAGGTTAAACAAGTGTGGAGTAGCAGCCCCAGATCTGATG
TACAACTTAAAGATATAGGAAAATGGCAGAATAACCTGTTCGCGTCCCCCCAGTTTGGTT
TCTTTGTCCTGACGACCTCAGCTGGCTTCATGGACCACAAAGAGGCATGACGAAAACACA
CAGGATGGGAAATCCTGGGATTCTTT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVI-SPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFF
MMK.GYIG..EI..D.RAGKIVVNL.GRLNKCGV..SPR.DVQLKD..KWQNNL..S.QFGF.VLTTSAG.MDH.EA.RKHTG..ILGFF
Retrocopy
MMKLGYIGKAEITNDNRAGKIVVNLMGRLNKCGVA/SPRSDVQLKDIGKWQNNLFASPQFGFFVLTTSAGFMDHKEA*RKHTGWEILGFF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide