RetrogeneDB ID:
retro_mputfur_45
Organism:
Location:
GL896904.1:10441807-10442188 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
97.62 %
Coverage:
93.33 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
Histidine triad nucleotide binding protein 1 [Source:UniProtKB/TrEMBL;Acc:G9K4C0]

Genomic region (view in browser)





>retro_mputfur_45
ATGGCAGATGAGATCGCCAAGGCTCAGGCCGCGCAGCCTGGTGGTGACACAATCTTCGGG
AAGATCATTTGCAAGGAAATCCCAGCCAAAATCATTTTTGAGGATGACCATTGTCTTGCT
TTCCATGACATTTCCCCTCAAGCACCAACTCATTTTCTGGTGATACCCAAGAAACATATA
TCCCAGATTTCTGTAGCAGAAGATGATGATGAAAGTCTTCTTGGACATTTAATGATTGTT
GGCAAGAAATGTGCTGCTGATTTGGGCCTGAAGAAGGGTTATCGAATGGTGGTGAATGAA
GGTTCAGATGGGGGACAGTCTGTCTATCATGTTCATCTCCATGTTCTTGGAGGTCGGCAG
ATGAATTGGCCTCCTGGTTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MADEIAKAQAARPGGDTIFGKIIRKEIPAKIIFEDDQCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLKKGYRMVVNE
MADEIAKAQAA.PGGDTIFGKII.KEIPAKIIFEDD.CLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLKKGYRMVVNE
Retrocopy
MADEIAKAQAAQPGGDTIFGKIICKEIPAKIIFEDDHCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLKKGYRMVVNE


Parental protein
GSDGGQSVYHVHLHVLGGRQMNWPPG
GSDGGQSVYHVHLHVLGGRQMNWPPG
Retrocopy
GSDGGQSVYHVHLHVLGGRQMNWPPG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide