RetrogeneDB ID:
retro_mputfur_454
Organism:
Location:
GL896910.1:19264844-19265263 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
57.24 %
Coverage:
73.33 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
FAM168B
Parental gene aliases:
No gene alias available
Parental gene description:
family with sequence similarity 168, member B [Source:HGNC Symbol;Acc:27016]

Genomic region (view in browser)





>retro_mputfur_454
TACACTTTCAGCACACCTTACAAGTGTCCTGTTCCTCCACTAGTGGGACAGTGCCACCGT
ACTCTTCCTCCCCTGACCCCTACCAGACTGCTGTGGACCCCAAGCAAAGTGCCGACCCCC
AGCAAAGGCCCAACGCACAGTAAGGCATGTGCTATACGCAGTGCCCATGTGTCCCGCCTG
CTCGCATCATGCAACACACCAAGGGGCCGCAGCCCAAGTGCACGCAGGGGACAGTGTACG
CTGCTCCCAAACCTCCACCTAGAAGCATGGGCATGGTGGCTGGGGCCACTATGGCCATGT
CGACAGGTACCCTGCTGACCACCCACTCCCCAGTTTCTGCTACCCTCCCCATGCAGTCAC
TGTGCCCATGTACTGGGGCCTGGGGAACACCCATCTACAGCGAGGTACACTGTCCGTGG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
YTPGTPYK-VSCSPTSGAVPPYSSSPNPYQTAVYPVRSAYPQQSPYAQQGTYYTQPLYAAPPHVIHHTTVVQPNGMPATVYPAPIPPPRGNGVTMGMVAG
YT..TPYK.VSCS.TSG.VPPYSSSP.PYQTAV.P..SA.PQQ.P.AQ.G..YTQ.....P.....HT...QP.....TVY.AP.PPPR.....MGMVAG
Retrocopy
YTFSTPYK/VSCSSTSGTVPPYSSSPDPYQTAVDPKQSADPQQRPNAQ*GMCYTQCPCVPPARIMQHTKGPQPKCTQGTVYAAPKPPPR----SMGMVAG


Parental protein
TTMAMSAGTLLTAHSP-TPVAPHPVTVPTYRAPGTPTYSYVPPQW
.TMAMS.GTLLT.HSP.....P.....P...A.GTP.YS.V...W
Retrocopy
ATMAMSTGTLLTTHSPVSATLPMQSLCPCTGAWGTPIYSEVHCPW


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide