RetrogeneDB ID:
retro_mputfur_457
Organism:
Location:
GL896910.1:20683725-20684078 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
56.1 %
Coverage:
69.32 %
Frameshifts:
1
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_457
ATGAAGGCCTCAGGCATACTACAAGACTATAAGATGATGGAGTACTTCCTTCTCACTCCC
AAATGCTACTCACTGCACTTTACCACATGCTAATCTTTGTACCTAATCATGTCATTGCCA
AGTCCTGCTTCTGGTACTTTCTGTCAGAGCTGAAGAAGTTTTCAGAAAGAATGGACTACT
GTGAGCAGAGACTTAAGAAATTTCCCCTGCGGGTAACAAACTTTGGCATCTAACTGTGCT
ACAACTCCTACAGTGGCATCCATATGTACTAGGTATATAGGGATCTGATCACTGTGGGCA
CTGTCACCCAGGGCTATCATGACATGGGGGCACAGGACAGCACCTACGTCCAT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MKASGTLREYKVVGRCLPTPKCRT-PPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRD
MKASG.L..YK.....L.TPKC.....LY.M.IF.PNHV.AKS.FWYF.S.LKK....S....YC.Q...K.PLRV.NFGI.L.Y.S.SG.H.MY..YRD
Retrocopy
MKASGILQDYKMMEYFLLTPKCYS/TALYHMLIFVPNHVIAKSCFWYFLSELKKF---SERMDYCEQRLKKFPLRVTNFGI*LCYNSYSGIH-MY*VYRD


Parental protein
LTTAGAVTQCYRDMGARHRARAH
L.T.G.VTQ.Y.DMGA......H
Retrocopy
LITVGTVTQGYHDMGAQDSTYVH


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide