RetrogeneDB ID:
retro_mputfur_459
Organism:
Location:
GL896911.1:3397709-3398086 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
68.75 %
Coverage:
91.37 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_459
ATTAATACTGTCACCATCTTGGTGAAAAACAAGAAGACTCAGTTGGTAGTGAATGCACAT
GATGTGGATCCCATCAAGCTGGTAGTCTTCCCACCCACCCTGTCATTAGATGAGGGTTCC
CTCTGCATTGTCAAGAGTCAGGTAGGCTGGGGCATCTGGCCCACAGAAAGATCTGTACCA
CCGTTGCCTTCACACAGGTTAACTCGGGAGATAAAGGAGCTCTGGCTAAGGGGGTGGAAG
CCATCAGGACCAATTATAATGACAAATATGATGAGATCTGCCATCACTAGGGAGACAACG
TCCTGGGTTCAAAATCAGAGGCTCACAGTACCAAGTTGGAAAAGGCAAAGACTGAGGAAG
TAGCAGAAAAACTAGGT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
VNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKA-RLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNERYDEIRRHWG
.NTVT.LV.NKK.QLVV.AHDVDPI.LVVF.P.L....G...CI.K....RLG.L.HRK.CTTVAFTQVNS.DKGALAK.VEAIRTNYN..YDEI..H.G
Retrocopy
INTVTILVKNKKTQLVVNAHDVDPIKLVVFPPTLSLDEG-SLCIVKSQV/RLGHLAHRKICTTVAFTQVNSGDKGALAKGVEAIRTNYNDKYDEICHH*G


Parental protein
GNVLGPKSVARIAKLEKAKAKELATKLG
.NVLG.KS.A...KLEKAK..E.A.KLG
Retrocopy
DNVLGSKSEAHSTKLEKAKTEEVAEKLG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide