RetrogeneDB ID:
retro_mputfur_46
Organism:
Location:
GL896970.1:2911834-2912887 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
87.92 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
TMEM185A
Parental gene aliases:
No gene alias available
Parental gene description:
transmembrane protein 185A [Source:HGNC Symbol;Acc:17125]

Genomic region (view in browser)





>retro_mputfur_46
ATGAACCCCAGGGGCCTGTTCCAGGACTTCAACCCGAGTAAGTTCCTCATCTACGCCTGC
CTGCTGCTCTTCTCCGTGCTGCTGCCCCTCCGCCTGGACGGCATCATACAGTGGAGCTAC
TGGGCCGTCTTCGCCCCCATATGGCTGTGGAAGCTGCTGGTCATCGCCGGCGCCTCAGTG
GGTGCGGGCGTTTGGGCCCGCAACCCTCGCTACCGCACCGAGGGGGAGGCCTGCGTGGAG
TTCAAAGCCATGTTGATCGCCGTGGCCATCCACCTGCTGCTGCTCATGTTCGAAGTCCTG
GTCTGCGACCGGGTGGAGAGGGGGACCCACTTCTGGCTGCTGGTCTTCATGCCACTGTTC
TTCGTATCCCCAGTGTCCGTGGCCGCCTGCGTCTGGGGCTTCCGACACGACAGGTCGCTA
GAGCTGGAGATCCTGTGCTCAGTCAACATCCTGCAGTTCATCTTCATCGCCCTGAGGCTG
GACAGGATTATCCATTGGCCGTGGCTTGTGGTGTTCGTGCCCCTGTGGATTCTCATGTCG
TTCCTCTGCCTAGTCGTCCTCTATTACATCGTCTGGTCCCTCCTGTTCCTGCGTTCCTTA
GATGTGGTCGCGGAACAGCGGAGGACCCATGTGACCATGGCCATCAGCTGGATAACGATC
GTCGTGCCCCTGCTCACTTTTGAGGTTCTGCTGGTTCACAGATTAGATGGCCACAATACA
TTCTCTCACATCTCCATATTTGTCCCCCTTTGGCTTTCTCTAATAACTTTAATGGCCACG
ACATTTAGGCGAAAAGGAGGCAACCATTGGTGGTTTGGTATTCGCAGAGATTTCTGTCAG
TTTCTGCTTGAAATTTTCCCGTTTTTAAGAGAATATGGGAACATTTCCTATGATCTACAT
CATGAAGACAGTGAAGATGCTGAAGAAACATCAGTCCCAGATGCTCCTAAAATTGCTCCA
ATGTTTGGAAAGAAGGCCAGGGTAGTTATAACCCAGAGTCCTGGGAAATACGTTCCCCCG
CCTCCCAAATTAAATATCGATATGCCGGATTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MVIVGASVGTGVWARNPQYRAEGETCVEFKAMLIAVGIHLLLLMFEVLVCDRIERGSHFWLLVFMPLFFVSPVSVAACVWGFRHDRSLELEILCSVNILQ
.VI.GASVG.GVWARNP.YR.EGE.CVEFKAMLIAV.IHLLLLMFEVLVCDR.ERG.HFWLLVFMPLFFVSPVSVAACVWGFRHDRSLELEILCSVNILQ
Retrocopy
LVIAGASVGAGVWARNPRYRTEGEACVEFKAMLIAVAIHLLLLMFEVLVCDRVERGTHFWLLVFMPLFFVSPVSVAACVWGFRHDRSLELEILCSVNILQ


Parental protein
FIFIALRLDKIIHWPWLVVCVPLWILMSFLCLVVLYYIVWSVLFLRSMDVIAEQRRTHITMALSWMTIVVPLLTFEILLVHKLDGHNAFSCIPIFVPLWL
FIFIALRLD.IIHWPWLVV.VPLWILMSFLCLVVLYYIVWS.LFLRS.DV.AEQRRTH.TMA.SW.TIVVPLLTFE.LLVH.LDGHN.FS.I.IFVPLWL
Retrocopy
FIFIALRLDRIIHWPWLVVFVPLWILMSFLCLVVLYYIVWSLLFLRSLDVVAEQRRTHVTMAISWITIVVPLLTFEVLLVHRLDGHNTFSHISIFVPLWL


Parental protein
SLITLMATTFGQKGGNHWWFGIRKDFCQFLLEIFPFLREYGNISYDLHHEDNEETEEAPVPEPPKIAPMFRKKTRVVITQSPGKYVLPPPKLNIEMPD
SLITLMATTF..KGGNHWWFGIR.DFCQFLLEIFPFLREYGNISYDLHHED.E..EE..VP..PKIAPMF.KK.RVVITQSPGKYV.PPPKLNI.MPD
Retrocopy
SLITLMATTFRRKGGNHWWFGIRRDFCQFLLEIFPFLREYGNISYDLHHEDSEDAEETSVPDAPKIAPMFGKKARVVITQSPGKYVPPPPKLNIDMPD


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide