RetrogeneDB ID:
retro_mputfur_464
Organism:
Location:
GL896911.1:7207066-7207478 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
58.45 %
Coverage:
96.48 %
Frameshifts:
4
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_464
ATGCCCTCTAGACTGAGGATGACCTGGGAATTTTGGGGTCACGTGAGCCATGGCCAAGGC
CACTTAGGCAAGAAAGAAGCACCCCAGAGGCCAGGGTAATGCTGGTGGCATGCATCACCA
CAGGATCAACTTTGACAAAGATCACTCAGGTGACTTTGGAAAAACTGGTATGAGCCATTA
ACACTTAAAGAGGAACCAGAGCTTCTGCCCAACTGTCAACCTTGTTATACTGTAGTCCCT
TGTCAGTCAGTGAGCAGACCCAGGGACATGCTGCCCAAAACAGGACTGGAGCTGCTCCTG
TCATTGATGGGGTGTGATGGGGTACTACAGAGTTCTGGGAGAGGGAATTCTCCCCAAACA
ATCTGGCATTATGAAGGCCAGATTCTTCAGTAGAAGAGCTGAGGAGAGGATT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MPSRLRKTRKLRGHVSHGHGRIGK-HRKHPGGR-GNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKRNQSFCPTVNLDKLWTLVSE-QTRVNAAKNKTGA
MPSRLR.T....GHVSHG.G..GK..R..P..R.GNAGGMHHHRINFDK.H.G.FGK.GM.H.HLKRNQSFCPTVNL..L..LVS....R......KTG.
Retrocopy
MPSRLRMTWEFWGHVSHGQGHLGK/ERSTPEAR/GNAGGMHHHRINFDKDHSGDFGKTGMSH*HLKRNQSFCPTVNLVIL*SLVSQ/VSRPRDMLPKTGL


Parental protein
APIIDVVR-SGYYKVLGKGK-LPKQPVIVKAKFFSRRAEEKI
..........G.....G.G..LPKQ..I.KA.FFSRRAEE.I
Retrocopy
ELLLSLMGCDGVLQSSGRGN\LPKQSGIMKARFFSRRAEERI


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide