RetrogeneDB ID:
retro_mputfur_467
Organism:
Location:
GL896911.1:20642638-20643115 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
62.8 %
Coverage:
99.39 %
Frameshifts:
2
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_467
ATGGCCAAGTCCAAGAACCACACCATGCATCACCGGTCATGAAAATGGCCCAGAAATGGC
ATCAAGAAACCTCAGTCACAAAGATATAAATCTCTTTGGGGGTAGACCCCAAGTTCCTGA
GGAACATATGCTTTGGCAAAAAACACAACAAGAAGGACCTAGAAAGAATGCAGGCCAACA
ACATCAAGGCCATGAGTGCACAGGCCCACACTGTCAAGGGCCTCATCAACCTCAAGGAGG
CCAAGCCCAAGATCCCAACGGTTTGCAGTCACAAGCTGAACCGACTTGCCTACATTGCTC
ACCCAAAGCTCAGGAAATGTTCTCATGCCCACACTGCCAAGGGTCTCAGGCTCTGCTGGA
CAAATGCCAAGGTCAAAGCTCAAACCAAAGCCCAGGTTGTGCCTTCAAATCCAATCTCCA
GCCCCTCTTTGGTGTGCCTCAGGTTCCCAAAATATCCCAGGCCCCACAAAGCCTCCA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESL-KGVDPKFLRNMRFAKKHNKKGLKKMQANNAKAMSARAEAIKALVKPKEVKPKIPKGGSRKLNRLAYI
MAKSKNHT.H..S.KW.RNGIKKP.SQRY.SL..GVDPKFLRN..F.KKHNKK.L..MQANN.KAMSA.A...K.L...KE.KPKIP...S.KLNRLAYI
Retrocopy
MAKSKNHTMHHRS*KWPRNGIKKPQSQRYKSL/LGVDPKFLRNICFGKKHNKKDLERMQANNIKAMSAQAHTVKGLINLKEAKPKIPTVCSHKLNRLAYI


Parental protein
AHPKLGKRARARIAKGLRLCRPKSKAKAQTKAQASAATP-APAPAPAPAAAQTPKGAQAPTKAP
AHPKL.K...A..AKGLRLC....K.KAQTKAQ.....P..PAP.......Q...G...PTK.P
Retrocopy
AHPKLRKCSHAHTAKGLRLCWTNAKVKAQTKAQVVPSNP\SPAPLWCASGSQNIPG---PTKPP


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide