RetrogeneDB ID:
retro_mputfur_477
Organism:
Location:
GL896912.1:4630831-4631277 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
70.32 %
Coverage:
54.48 %
Frameshifts:
3
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_477
TCCAGGAATGTTGGCCAGCAAGCTGTGCTGAAGTGTCCTGTGCTCTTGGAGCCCCTCTTA
TGGCCAGCCATTTCACTCCCAGAACCTTCACTAACCAGATCCAGGCAGCCTTCTGGGAGC
CAAGACTTCTAGTGGTTACTGATCCCAGGGCTGCCCACCAGCCTCTCACAGAGGTGTCTT
ATGTTAACCTGCCTACCATGGCTCATGTAACACAGATTCTCCCTAGTGCTATGTGGACAT
GGCCATCCCTCGCAACAACAAGGGAGCCCAGTCAAGTGGGTCTGATGTTGGCCGGGGAAG
TTCTGTGCATCTGTGGCACCAATTCCCCTGAACACCCATGGGAGATCATGCCTGATCCCT
ACTTCTGCAGAGATTCTGAAGAGTTGGAAAAGGAAGAGCAGACTGATGCTGGGAAGACTG
TGACCCAGGAGGAATGGCAGGGTCAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SRNTGQRAVLK-FAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIA-LCNTDSPLRYVDIAIPCNNKGAHS-VGLMW
SRN.GQ.AVLK....A.GA...A..FTP.TFTNQIQAAF.EPRLLVVTDPRA.HQPLTE.SYVNLPT.A..CNTDSP..YVD.AIP.NNKGA.S.VGLM.
Retrocopy
SRNVGQQAVLK/VSCALGAPLMASHFTPRTFTNQIQAAFWEPRLLVVTDPRAAHQPLTEVSYVNLPTMA/SCNTDSP*CYVDMAIPRNNKGAQS\VGLM-


Parental protein
WMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGE
..LA.EVL...GT.S.EHPWE.MPD.YF.RD.EE.EKEEQ..A.K.VT.EE.QG.
Retrocopy
--LAGEVLCICGTNSPEHPWEIMPDPYFCRDSEELEKEEQTDAGKTVTQEEWQGQ


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide