RetrogeneDB ID:
retro_mputfur_48
Organism:
Location:
GL896960.1:6625668-6626463 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
82.35 %
Coverage:
84.03 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_48
ATGGCTTGTGGTCCTAAGAAGCATCTGAGGCGTGTAGCAGCGCCAAAGCATTGGATGCTG
GATAAACTGACCAATGTGTTTGCTCCTCACCCATCTGCTTGTCCCCATAAGTTGAGAGAA
TGTCTCCCTTTCATCATTTTCCTAAGGAACAGACTTAAGTATACCCTAACAGGAGATGAA
GTAAAGAAGATCTGTATGCGGGGTTTTATTAAGATCAATGGCAAGGTCCAAACTGATATG
ACCGGCCCAGCTGGCTTTATGGCTGTCATCAGCATGGACAAGCCTGGGGAGAATTTCCTT
CCGATCTATGACACCAAGCGTCGCTTTGCTCTTCATCGCATTACACTTGAGGCCAAGTAC
AAGTTGTACAAAGTGAGAAAAATCTTTGTGGGGACAAAAGGAATCCCCCATCTGGTGACT
CACGAGGTTCGTACCATCCGCTATCCTGATCCCCTCATCAAGGTGAATGACGCCATCCAG
ATTGATCTGGAGACCAGAAAGCTTACTGATTTCATCAAGTTTGACACTGATAATATGTGT
ATGGTGACTAGGGGTGCTAGCCTGGGAAGTACTGGTGTGATCACCAACAGAGAGAGACAC
CCCAGTTCGTTTGATGTTGTTCACATGAAAGATGCCATTGGCAACAGCTTTGCTACCCAA
CTACCAACATTTTTGAAGTATCAAATACTGGCAAAGGCAACAAACTATAGATTTCTCTTC
CCCATGGAAAGGATATCTGCCCCACCATTGCTGAAGAGGGAGACAAGACTGGCGGCCAAA
CAGAGCAGCCGGTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRL
A.GPKKHL.RVAAPKHWMLDKLT.VFAP.PS..PHKLRECLP.IIFLRNRLKY.LTGDEVKKICM..FIKI.GKV.TD.T.PAGFM.VIS.DK.GENF..
Retrocopy
ACGPKKHLRRVAAPKHWMLDKLTNVFAPHPSACPHKLRECLPFIIFLRNRLKYTLTGDEVKKICMRGFIKINGKVQTDMTGPAGFMAVISMDKPGENFLP


Parental protein
IYDTKGRFAVHRITLEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERH
IYDTK.RFA.HRITL.EAKYKL.KVRKIFVGTKGIPHLVTH..RTIRYPDPLIKVND.IQIDLET.K.TDFIKFDT.N.CMVT.GA.LG..GVITNRERH
Retrocopy
IYDTKRRFALHRITL-EAKYKLYKVRKIFVGTKGIPHLVTHEVRTIRYPDPLIKVNDAIQIDLETRKLTDFIKFDTDNMCMVTRGASLGSTGVITNRERH


Parental protein
PGSFDVVHVKDANGNSFAPRL
P.SFDVVH.KDA.GNSFA..L
Retrocopy
PSSFDVVHMKDAIGNSFATQL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide