RetrogeneDB ID:
retro_mputfur_481
Organism:
Location:
GL896912.1:1426166-1426711 (-)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
70.49 %
Coverage:
54.05 %
Frameshifts:
2
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_481
TGGAATGATGCTGATGCTGAGTACTTTGTGGAGTCCACTGAGGTCCTTCAGCACCATGGA
GAAGCCTGGGGCTCATTTGAAGGGTAAAGTTAAGAGAGTCATCATTTCTGCCCATCCTGC
TGATACTTCCATATTTGTGATGAGTTGGAACCATGAGAAATATGACAACTCTCTCAAGAC
TGTCAGCAATGCCCCCTCTACAACCAAATGTTTGGGCCCTCTGGCAGGAGTCATCCATGA
TAACTTTGGCAGAGTAGAGGGCCTCACGACCACAGTCTCTGTCATCACTACCACCCTGAA
GACTGTCAATGACCCCTCTGGGAAGCTGTGGTGTGGTGGCCAAGAGACTAGTCAGAACAT
CATCTCTGCTTCTACTGGTGCTGCCAAGGCTGTAGACAAGGTCATCCTTGTATTGAATGG
GAAGCTCATTGGTATGGCCTTCCATGCCCCCATCCCCAACCAACATGTGAGTCATGAATC
TGACCTGCAATCTGGAGAAAACTACCAAATATGATGACATCAAGGTGGTGGTGAAGCAAG
CATCC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
WGDAGAEYVVESTGV-FTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQ
W.DA.AEY.VEST.V.F.TMEK.GAHLKG..KRVIISA..AD...FVM..NHEKYDNSLK.VSNA..TT.CL.PLA.VIHDNFG.VEGL.TTV..IT.T.
Retrocopy
WNDADAEYFVESTEV\FSTMEKPGAHLKGKVKRVIISAHPADTSIFVMSWNHEKYDNSLKTVSNAPSTTKCLGPLAGVIHDNFGRVEGLTTTVSVITTTL


Parental protein
KTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVP-TP-NVSVVDLTCRLEKAAKYDDIKKVVKQAS
KTV..PSGKLW..G....QNII.ASTGAAKAV.KVI..LNGKL.GMAF..P..P.N..V..LTC.LEK..KYDDIK.VVKQAS
Retrocopy
KTVNDPSGKLWCGGQETSQNIISASTGAAKAVDKVILVLNGKLIGMAFHAP\SPTNM*VMNLTCNLEKTTKYDDIKVVVKQAS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide