RetrogeneDB ID:
retro_mputfur_482
Organism:
Location:
GL896912.1:12106387-12106709 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
61.82 %
Coverage:
62.29 %
Frameshifts:
1
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_482
GTGGCCCAGGAGAAGCACTAGGGCACTGAGCTTCTCTTGCAGGTGCAAAACCAGTCCAGT
GGCAGGGCCCTCTTCTAGGACATGGAGAAGCCGTCCCAAGATGAGTGGAAGGGGAACCCT
GGATGCCATGGAAGGCACCCTGGTTCCAGAGAAGAGCCTGGGCTGGTCCCTTTGGAATCT
GCCTGCTCTGGGTTCTGCCCGCTCAGGCCCCCACCTCTGTGACTTCCTGGAGAGCCACTT
CCTAGATGAGGAGGTGAGAGTCAGCAAGTAGATGGGCGACCACCCAACTAGGAGCATCAA
GAGCCCAGCAGCCTTCCAGGGG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
LAEEKREGAERLLKMQNQRGGRALFQDVQKPSQDEWGK-TLDAMEAALVLEKSLNQALLDLHALGSARTDPHLCDFLENHFLDEEVKLIKKMGDHLTNLR
.A.EK..G.E.LL..QNQ..GRALF.D..KPSQDEW...TLDAME..LV.EKSL...L..L.ALGSAR..PHLCDFLE.HFLDEEV...K.MGDH.T..R
Retrocopy
VAQEKH*GTELLLQVQNQSSGRALF*DMEKPSQDEWKG\TLDAMEGTLVPEKSLGWSLWNLPALGSARSGPHLCDFLESHFLDEEVRVSK*MGDHPT--R


Parental protein
RLAGPQAGLG
....P.A..G
Retrocopy
SIKSPAAFQG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide