RetrogeneDB ID:
retro_mputfur_486
Organism:
Location:
GL896913.1:6269548-6270080 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
71.98 %
Coverage:
100.0 %
Frameshifts:
4
Stop codons:
2


Parental gene:
Parental gene symbol:
Eef1e1
Parental gene aliases:
No gene alias available
Parental gene description:
eukaryotic translation elongation factor 1 epsilon 1 [Source:MGI Symbol;Acc:MGI:1913393]

Genomic region (view in browser)





>retro_mputfur_486
ATGATGGCAGCTGCAGAGCTGACCCTGCTTTGGGGACTTCTGGAGAAGTCCCTGGGGCAG
AGGAAAGGGAACAAAGACAGTGCTCAAAGCTAGCGCCAGGTTCCTGTTCTTCAAACAAAC
AATGGTCCACATCCAACAGGACTGACTACTACCAGCTTATCTTGTCAAGCAGGTGAACAA
AGAAGATTTGCTTGGGAGCACTGCAAAAGAAAAAGCAATTGTTCAGCAGTGGTTGGAAAA
CAGAGTAACTCAAGTTACATGGACACTACAATAAAGGCAGTATCCGTCTCTGTTGGAGGA
TCTTAATTCCGGTCTGGAAGATAAAGTCTACCTTACAGGATTTAACTCTACCTTAGCAGA
TATCCTACTGTACTATGGACTTCATCGCTTTAGAGTTGACCTGACAGTTCCCGAAAAGGA
GAAACATCTTAATGTGTCTTGCTGGTTTTGTCACATTCAGCACTATCTAGGGATTAAGAA
ACATCTGTCTGTTGTCCTCTTTATCAAGAACAGGCTATATACTAATTCCCAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAAAAELT----LLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAH-LVKQANKEYLLG-STAEEKAIVQQWLEYRVTRV-DGHSNKDDIR-
M.AAAELT....LLEKSLG..KGNK.SAQ..RQ.PVLQTNNGP..TGLTT.....L.....K...LG.STA.EKAIVQQWLE.RVT.V..GH.NK..IR.
Retrocopy
MMAAAELTLLWGLLEKSLGQRKGNKDSAQS*RQVPVLQTNNGPHPTGLTTTSLS/LSSR*TKKICLG/STAKEKAIVQQWLENRVTQV\HGHYNKGSIR/


Parental protein
TLLKDLNSYLEDKVYLTGYNFTLADILLYYGLHRFIVDLTVQEKEKYLNVSRWFCHIQHYPGIRQHLSIVVFIKNRLYTNAH
.LL.DLNS.LEDKVYLTG.N.TLADILLYYGLHRF.VDLTV.EKEK.LNVS.WFCHIQHY.GI..HLS.V.FIKNRLYTN.H
Retrocopy
SLLEDLNSGLEDKVYLTGFNSTLADILLYYGLHRFRVDLTVPEKEKHLNVSCWFCHIQHYLGIKKHLSVVLFIKNRLYTNSH


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide