RetrogeneDB ID:
retro_mputfur_49
Organism:
Location:
GL896912.1:10814246-10814666 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
64.55 %
Coverage:
85.04 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
SNCG
Parental gene aliases:
No gene alias available
Parental gene description:
synuclein, gamma (breast cancer-specific protein 1) [Source:HGNC Symbol;Acc:11141]

Genomic region (view in browser)





>retro_mputfur_49
ATGGATGTATTCATGAAAGGACTTTCAAAGGCCAAGGAGGGAGTTGTGGCTGCTGCTGAA
AAAACCAAACAGGGTGTGGCAGAAGCAGCAGGAAAGACAAAAGAGGGTGTTCTCTATGTA
GGCTCCAAAACCAAGGAAGGAGTAGTTCATGGTGTGACAACAGTGGCTGAGAAGACCAAA
GAGCAAGTGACAAATGTGGGTGAGGCGGTGGTGACGGGGGTGACAGCAGTAGCACAGAAG
ACTGTGGAGGGAGCAGGGAGCATTGCAGCTGCCACTGGCTTTGGCAAAAAGGATCAGCTG
GGCAAGAGTGAAGAAGGAGGCCCACAGGAAGGAATTCTGGAAGATATGCCAGTTGATCCT
GACAATGAAGCATATGAAATGCCTTCTGAGGAAGGGTATCAAGACTATGAACCCGAAGCC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MDVFKKGFSIAKEGVVGAVEKTKQGVTEAAEKTKEGVMYVGAKTKENVVQSVTSVAEKTKEQANAVSEAVVTSVNTVAIKTVEEAENIAVTSGVVRKEDL
MDVF.KG.S.AKEGVV.A.EKTKQGV.EAA.KTKEGV.YVG.KTKE.VV..VT.VAEKTKEQ...V.EAVVT.V..VA.KTVE.A..IA...G...K..L
Retrocopy
MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVTTVAEKTKEQVTNVGEAVVTGVTAVAQKTVEGAGSIAAATGFGKKDQL


Parental protein
--EQPAAPQE
.......PQE
Retrocopy
GKSEEGGPQE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide