RetrogeneDB ID:
retro_mputfur_497
Organism:
Location:
GL896915.1:14403910-14404235 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
75.0 %
Coverage:
80.29 %
Frameshifts:
2
Stop codons:
1


Parental gene:
Parental gene symbol:
ATP5G1
Parental gene aliases:
No gene alias available
Parental gene description:
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) [Source:HGNC Symbol;Acc:841]

Genomic region (view in browser)





>retro_mputfur_497
CAGACCGCCGGGGCAGTATTCATTTCTTCGGCTCTGATTTGCTCTTGTACCAGGAACCTA
ATCAGCCCTGTGTCTGCCTCCCTCTTGAGCAGGCCAGAGATCCCAGCTAAACAGCCATCC
TAGAGCAGCTCCCTGTTCCAGATGGCCCAACGGGGGTTCCAGACCAGTGTTGTCTCCTGG
GACATTGACACAGCAGCCAAGTTTATTGGCGCTGGGGCTGCCACAGTTGGTGTGTCTGGT
TCAGAGGCTGGCATTGGAACAGCATTGGGCAGCTTGACCTTCGCTATGCCAGGAACCCGT
CTTCAAGCAGCAGCTCTTCTCATTC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
QTTGALLISPALIRCCTRDLIRPVSASLLSRPDIPAKQPSYSSNSPLQVARREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLI-IGYAR
QT.GA..IS.ALI..CTR.LI.PVSASLLSRP.IPAKQPS.SS.S..Q.A.R.FQTSVVS.DIDTAAKFIGAGAATVGV.GS.AGIGT..GSL....YAR
Retrocopy
QTAGAVFISSALICSCTRNLISPVSASLLSRPEIPAKQPS*SS-SLFQMAQRGFQTSVVSWDIDTAAKFIGAGAATVGVSGSEAGIGTALGSLT/LRYAR


Parental protein
NPS-LKQQLFSY
NPS..KQQLFS.
Retrocopy
NPS/FKQQLFSF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide