RetrogeneDB ID:
retro_mputfur_499
Organism:
Location:
GL896915.1:14614658-14614950 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
65.69 %
Coverage:
64.74 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
RPS27A
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S27a [Source:HGNC Symbol;Acc:10417]

Genomic region (view in browser)





>retro_mputfur_499
ATGCAGGTTTTTGTGAAAACCCTTATGGAGAAGACCATCCCTCTTGAGGTTGAACTCTCG
GATACAATAGGAAATGTAAAGGCCGACATTCAGGATAAGGAAGGAATTCCTCCTGATCAA
GAGACTGATCTTTGCTGGCAAACAGCTGGAGGATGGATGTACATGGTCTCAAGACAACAT
TCGTGTGTTGAGACTTAGTAGTGGTGCTAAGAAAAGAAAGAAGGTGCCAAGAAAGAAGTC
TTATACCACGCCCACGAAGGATAAGCATAAGAGAAAGAAGGTTAAACTGTCC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVK
MQ.FVKTL..KTI.LEVE.SDTI.NVKA.IQDKEGI.P..Q.RLIFAGKQLEDG.T.S..NI.....L.L........K...KKSYTTP.K.KHKRKKVK
Retrocopy
MQVFVKTLMEKTIPLEVELSDTIGNVKADIQDKEGI-PPDQ\RLIFAGKQLEDGCTWSQDNIR---VLRLSSGAKKRKKVPRKKSYTTPTKDKHKRKKVK


Parental protein
LA
L.
Retrocopy
LS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide