RetrogeneDB ID:
retro_mputfur_500
Organism:
Location:
GL896916.1:4009239-4009614 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
71.65 %
Coverage:
64.25 %
Frameshifts:
2
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_500
TCAGCTTAGAGGAAGCAAAGGTGCAACTGTCTTCAGTCATCTCAAATCCAGGTTCATCCA
ACTCCAGATGCCACCACCATGCTGCCTGCCTAAGTTCAAACCCAACCAGATCAAAATCAT
ATACCTGAAGTGCACCAGTGGGGAAGTCAGTGCCATTTCTGAGCTGGCCCCCAAGATTAG
CCCCCTAGATCTGTCACCAAAATAAGCTGGTGATGACATCATCAAGGCAACTGGTGATTG
GAAGGTTAGAGGATTACAGTGAAACTGACCACTCAGAACAGAAAGGCCCATATTGAAATG
GTACCTCCTGCCTCTGCCCTGATTATCAAAACCCTCAAGGAACCTCCAAGAGAGAAAAAG
CTGCAGAAAAACAGT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SARRRQRCNSLRSSRIRVHPTP-ATSAMP-PKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWK-GLRITVKLTIQNRQAQI
SA.R.QRCN.L.SS.I.VHPTP.AT...P.PKF.PN.IK..YL.CT.GEV.A.S.LAPKI.PL.LSPK..GDDI.KATGDWK.G.RITVKLT.QNR.A.I
Retrocopy
SA*RKQRCNCLQSSQIQVHPTPDATTMLP\PKFKPNQIKIIYLKCTSGEVSAISELAPKISPLDLSPK*AGDDIIKATGDWK/G*RITVKLTTQNRKAHI


Parental protein
EVVPSASALIIKALKEPPRDRKKQKNS
E.VP.ASALIIK.LKEPPR..K.QKNS
Retrocopy
EMVPPASALIIKTLKEPPREKKLQKNS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide