RetrogeneDB ID:
retro_mputfur_502
Organism:
Location:
GL896916.1:15030485-15031145 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
96.82 %
Coverage:
56.12 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_502
ATGGGGAAGGAAAAGACTCATATCAACATTGTTGTCATCGGACATGTAGATTCAGGCGAG
TCTACCACTACTGGTCATCTGATCTACAAATGTGGTGGGATTGACAAAAGAACTATCGAA
AAATTCGAGAAGGAGGCTGCTGAGATGGGAAAAGGCTCCTTCAAGTATGCCTGGGTCTTG
GATGAACTGAAAGCTGAACGTGAACGTGGTATCACCATTGATATCTCCCTGTGGAAATTT
GAGACCAGCAAGTATTACGTGACCATCATTGATGCTCCAGGACACAGAGATTTTATCAAA
AACATGATTACAGGCACATCCCAGGCTGACTGTGCTGTCCTGATTGTTGCTGCTGGTGTT
GGTGAATTTGAAGCAGGTATCTCCAAGAACGGGCAGACCCATGAGCATGCCCTTCTGGCT
TACACACTGGGTGTAAAACAACTAATTGTTGGTGTTAACAAAATGGATTCCACTGAGCCA
CCCTACAGCCAGAAGAGATACGAGGAAATCATTAAGGAAGTCAGCACCTACATTAAGAAA
ATTGGCTACAACCCCGACACAGTAGCATTTGTGACAATTTCTGGTTGGAATGGTGACAAC
ATGCTGGAGCCAAGTGCTAATATGCCTTGGTTCAAGGGATGGAAAGTCACCCGTAATGAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIK
MGKEKTHINIVVIGHVDSG.STTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLD.LKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIK
Retrocopy
MGKEKTHINIVVIGHVDSGESTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDELKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIK


Parental protein
NMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDN
NMITGTSQADCAVLIVAAGVGEFEAGISKNGQT.EHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEI.KEVSTYIKKIGYNPDTVAFV.ISGWNGDN
Retrocopy
NMITGTSQADCAVLIVAAGVGEFEAGISKNGQTHEHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIIKEVSTYIKKIGYNPDTVAFVTISGWNGDN


Parental protein
MLEPSANMPWFKGWKVTRKD
MLEPSANMPWFKGWKVTR..
Retrocopy
MLEPSANMPWFKGWKVTRNE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide