RetrogeneDB ID:
retro_mputfur_503
Organism:
Location:
GL896916.1:15152656-15153427 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
76.72 %
Coverage:
55.22 %
Frameshifts:
3
Stop codons:
2


Parental gene:
Parental gene symbol:
KYNU
Parental gene aliases:
No gene alias available
Parental gene description:
kynureninase [Source:HGNC Symbol;Acc:6469]

Genomic region (view in browser)





>retro_mputfur_503
CATGGCCTAGGAAAATGTCCTTGGATTACAGGAGATGAGATTATTTTAGGCCTTATGAAT
GACATTGTAGGAGCCAATAAGAAAGAAATAGCCCTAATAAATGATTTGACTGTTAATTTA
CATCTTCTGCTATTATCCTTGTGTAAGCCTACCCCAAGATGGTATAAAATTCTGAAAGCC
AAAGCCTTCCCTTCAGATCACTGTGCTATTGAGTCACAGCTTCAATTTCATAGGCTTAAC
ATTGAGGAAAGCATGTGGATGATAAAGCCAAGGGGGGGAAGAAAAGATTGAGTATAGAGG
ATATCCTTGAAGTAATCGAGAAGGAAGGAGACTCAGTTGCAGTGATCCTGTTCAGTGGGC
TGCATTTTAACACTGAATAGCTCTTTAATATATCTGCCATCACAAGAGCTGGACAAACAG
AGCATTGTTTTGTTGGCATTAATCTAGCACATGCGGTTGGAAATGTTGAACTCCGCTTAC
ATGACTGGGGAGTTGATTTTGTTTGCTGGTACTCCTATAAGTATTTAAATTTAGGAGCAG
GAAGTCTTGCTGGTGCCTTTATTCATGAAAAACATGCCCATACAATTAAAACTGAGCTAG
TGGGATGGTTTGGCCATAAATCAGCACCTGATTTAAGGTGAATTATAAACCGCAGTTAAT
CCCCGGGGTCGATGGATTTCAAATTTCAAACCCTCGCTTTTCTTGGTCTGTTCCTTACAC
ACCAGTTTAGAGATCTTTAAGCAAGCAACTATGAAAACATTGAGGAGAAAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
HDLGKRPWITGDETIVGLMNDIVGANEKEIALMNGLTVNLHLLLLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEKSMRIIKPREG-EETLR
H.LGK.PWITGDE.I.GLMNDIVGAN.KEIAL.N.LTVNLHLLLLS..KPTP..YKIL..AKAFPSDH.AIESQLQ.H.LNIE.SM..IKPR.G....L.
Retrocopy
HGLGKCPWITGDEIILGLMNDIVGANKKEIALINDLTVNLHLLLLSLCKPTPRWYKIL-KAKAFPSDHCAIESQLQFHRLNIEESMWMIKPRGG/KKRLS


Parental protein
TEDILEVIEKEGDSIAVILFSGLHFYTGQLFNIPAITKAGQAKGCFVGFDLAHAVGNVELHLHDWGVDFACWCSYKYLNSGAGGLAGAFVHEKHAHTIKP
.EDILEVIEKEGDS.AVILFSGLHF.T..LFNI.AIT.AGQ...CFVG..LAHAVGNVEL.LHDWGVDF.CW.SYKYLN.GAG.LAGAF.HEKHAHTIK.
Retrocopy
IEDILEVIEKEGDSVAVILFSGLHFNTE*LFNISAITRAGQTEHCFVGINLAHAVGNVELRLHDWGVDFVCWYSYKYLNLGAGSLAGAFIHEKHAHTIKT


Parental protein
ALVGWFGHE-LSTRFKMDNKLQLIPGVGGFRISN-PPILLVCSLHASLEIFKQATMKALRRK
.LVGWFGH...ST.FK...K.QLIPGV.GF.ISN.P...LVCSLH.SLEIFKQATMK.LRRK
Retrocopy
ELVGWFGHK/IST*FKVNYKPQLIPGVDGFQISN/PSLFLVCSLHTSLEIFKQATMKTLRRK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide