RetrogeneDB ID:
retro_mputfur_508
Organism:
Location:
GL896917.1:367521-367956 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
69.8 %
Coverage:
76.17 %
Frameshifts:
2
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_508
GGGAAGTCAGTGCCACGTCTGTCTGCCCTGGCCCCAGAGACCGGGCCCCCTGCGGCTGTC
TCCCAAAAAGCCTGGTGATGATGTGGCCAAGGCAACCGGTGATTGGAAAGGTCTGAGGAT
GACCATGAAACTGGCCATTCACAACAGACAGGCCCAGACTGAAGTGGGACCTTCTGCCTC
TGTCTTGCTTATCAAAGCCCTCAAGGAACCACCAAGAGACTGAAAGAAGCAGGAAAACAT
GAAGCACAGTGGAAACATCACTTTTGATGAGACTGTCAGCAATGCCCGACAGATGCGGCA
CTGATCTTCAGCCAGAGAACTCTCTGGAAGCACTGATGAGCCCCCAAGGACTGCCCAGTC
TGTGGGCTGCAATGTTGATACCATCACCCTCCCAACCCCACAGGTGACCTCAACAGTGGG
GCCGTGGGATGCCCC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
GGEVGATSALAPKIGP-LGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNSAVKHSGNITFDEIVNIARQ
G..V...SALAP..GP.L.LSPKK.GDD.AKATGDWKGLR.T.KL.I.NRQAQ.EV.PSAS.L.IKALKEPPRD.KKQ.N...KHSGNITFDE.V..ARQ
Retrocopy
GKSVPRLSALAPETGP\LRLSPKKPGDDVAKATGDWKGLRMTMKLAIHNRQAQTEVGPSASVLLIKALKEPPRD*KKQEN--MKHSGNITFDETVSNARQ


Parental protein
MRHRSLARELSGTIKEILGTAQSVGCNVDG-RHPHDIIDDINSGAVECP
MRH.S.ARELSG...E...TAQSVGCNVD...HP.....D.NSGAV.CP
Retrocopy
MRH*SSARELSGSTDEPPRTAQSVGCNVDT/HHPPNPTGDLNSGAVGCP


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide