RetrogeneDB ID:
retro_mputfur_518
Organism:
Location:
GL896917.1:3771527-3771720 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
76.92 %
Coverage:
52.03 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
TXNDC17
Parental gene aliases:
No gene alias available
Parental gene description:
thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:28218]

Genomic region (view in browser)





>retro_mputfur_518
CACATTGGTGAAGGATACGTGTTCATCTACTGCCAAGGAGGAGGAAAACCTGATTCGAAA
GATCCAAATAATGACTTCAGAAAAAAACCTCAAAGTAACAGCAGTGTCTGCACTCCTTAA
ATGTGGGACACCTCAGAAACTGGTAGAATCCCAGTGTCTTCAGGCAAAGCTTATGGAGAT
GCTGTTTGCTGAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
HMSEGCVFIYCQVGEKPYWKDPNNDFRK-NLKVTAVPTLLKYGTPQKLVESECLQANLVEMLFSE
H..EG.VFIYCQ.G.KP..KDPNNDFRK.NLKVTAV..LLK.GTPQKLVES.CLQA.L.EMLF.E
Retrocopy
HIGEGYVFIYCQGGGKPDSKDPNNDFRK\NLKVTAVSALLKCGTPQKLVESQCLQAKLMEMLFAE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide