RetrogeneDB ID:
retro_mputfur_52
Organism:
Location:
GL896951.1:10580380-10580851 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
98.08 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_52
ATGGCGCCGAAAGCTAAGAAGGAAGCCCCTGCACCTCCCAAAGCCGAAGCCAAAGCAAAG
GCTTTGAAAGCCAAGAAAGCGGTGCTGAAAGGCGTCCACAGTCACAAAAAAAAGAAGATC
CGCACATCACCTACGTTCCGACGACCCAAGACTCTGCGTCTCCGAAGGCAACCCAAATAC
CCTCGAAAGAGCGCCCGCAGGAGAAACAAGCTTGACCACTATGCCATCATCAAGTTCCCC
GTGACTACTGAGTCAGCCATGAAGAAAATAGAAGACAACAACACACTTGTGTTCATTGTG
GATGTCAAGGCCAACAAGCACCAGATCAAACAGGCTGTGAAGAAGCTCTATGACATTGAT
GTAGCCAAGGTCAACACCTTAATCAGGCCTGATGGAGAGAAGAAGGCATACATTCGGCTG
GCCCCTGATTATGATGCTTTGGATGTTGCCAACAAAATTGGGATCATCTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAPKAKKEAPAPPKAEAKAKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIV
MAPKAKKEAPAPPKAEAKAKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSA.RRNKLDHYAIIKFP.TTESAMKKIEDNNTLVFIV
Retrocopy
MAPKAKKEAPAPPKAEAKAKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSARRRNKLDHYAIIKFPVTTESAMKKIEDNNTLVFIV


Parental protein
DVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII
DVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAY.RLAPDYDALDVANKIGII
Retrocopy
DVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYIRLAPDYDALDVANKIGII


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide