RetrogeneDB ID:
retro_mputfur_521
Organism:
Location:
GL896917.1:5409466-5409832 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
69.67 %
Coverage:
63.21 %
Frameshifts:
0
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_521
TCCTCCTCAAGAATAGAGCACACAGACTGTGCTCGGTTGTCCTGAACCCGGGTTCATCCT
ACACCAGCTGCCTTCCCCAGGCCGCCTAAGTTTGACCCCAAGGAGATCAAAGTCGTGTAC
CCGAAGTGCACCGGTAGTGAAGTCAGTGCCACTTCTGCTCTGGCTCCAGAGATCGGCCCC
CTGGGGCTGTCTCCAGAAAAGGCTGGTGATGACGTGGCCAAGGCAACTGGAGATTGGAAA
GGTCTGAGGATGACCATGAAACTGGCCATTCACAACAGACAGGCCCAAACTGAAGTGGGA
CCTTCCGCCTCTGTCCTGCTTATCAAAGCCCCCAAGGAACTGCCAAGAGACTGAAAGAAG
CAGGAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SARRRQRCNSLRSSRIRVHPTPATSAMPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVV
S..R.......R.S..RVHPTPA....PPKFDP.EIKVVY..CTG.EV.ATSALAP.IGPLGLSP.K.GDD.AKATGDWKGLR.T.KL.I.NRQAQ.EV.
Retrocopy
SSSRIEHTDCARLS*TRVHPTPAAFPRPPKFDPKEIKVVYPKCTGSEVSATSALAPEIGPLGLSPEKAGDDVAKATGDWKGLRMTMKLAIHNRQAQTEVG


Parental protein
PSASALIIKALKEPPRDRKKQK
PSAS.L.IKA.KE.PRD.KKQ.
Retrocopy
PSASVLLIKAPKELPRD*KKQE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide