RetrogeneDB ID:
retro_mputfur_522
Organism:
Location:
GL896917.1:9114738-9115168 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
64.63 %
Coverage:
99.31 %
Frameshifts:
2
Stop codons:
1


Parental gene:
Parental gene symbol:
Rpl26
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]

Genomic region (view in browser)





>retro_mputfur_522
ATGAAGTTCAATCCCTTTATGACTTCTGACCAGAGCAGGAACCGTAAATGGCATTCTAGT
GCACCCTCCCATATTTGCAGGAAGATGATGTATTCCCCACTTTCCAAAGAGCTGAGACAG
TACAATGTGCGATTCACGGCCATCCGAAAGCATGATGAAGTACAGGCTGTGTGAGGACAC
TGTACAGAGGTCAGCAAATTGGCAAAGTCATCCAGGTTTACAAGAAGAAATACGTCATCC
ACACTGAACGAGTAGAGCAGGAGACGGTGGACAGCACACCGTCCACAGGGGCACTCACCC
TGGCAAGGGGCTTAGCAATAGACTCTAACTGTACAAAGACTGCAAAAAGATCCTTGAGCA
GAAAGCCAAATCTCATGAAGCAGGAAAGGAAAAGGGCAAATATAAAGATGAAACAATTGA
GAAGCAGGAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPI-RKDDEVQV-VRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGT-TVHV
MKFNPF.TSD.S.NRK.H..APSHI.RK.M.SPLSKELRQ.YNVR...I...D....V.VR..Y.GQQIGKV.QVY.KKYVI..ERV..E....T.TVH.
Retrocopy
MKFNPFMTSDQSRNRKWHSSAPSHICRKMMYSPLSKELRQ-YNVRFTAIRKHDEVQAV/VRTLYRGQQIGKVIQVYKKKYVIHTERVEQETVDST/TVHR


Parental protein
GIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEETIEKMQ
G.HP.K....RL.L.KD.KKILE.KAKS...GKEKGKYK.ETIEK..
Retrocopy
GTHPGKGLSNRL*LYKDCKKILEQKAKSHEAGKEKGKYKDETIEKQE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide