RetrogeneDB ID:
retro_mputfur_526
Organism:
Location:
GL896917.1:13704524-13704785 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
67.82 %
Coverage:
76.32 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
PPDPF
Parental gene aliases:
No gene alias available
Parental gene description:
pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish) [Source:HGNC Symbol;Acc:16142]

Genomic region (view in browser)





>retro_mputfur_526
TCCACTTCTGGTAACATCTCCTGTGCAAGTGCAGCCATCCCTCGCCACCCTGGTCTTGCC
AAGGCTGATTCAGGTTATTGGTGGGCAAGGTTCTTTTTTGGGAAGTCCACTCTCCCATTC
ATGGCTATAGTGTTGGAGTCTCCAGAAGGTTCAGAATCTCCTCAGGCCTCCAGTAGCATA
ATCACCTGTGACTCAGCTCTGGAAGCCTTGAGGAAGCAGCCTCGTGGCCAGCCTGGAAAA
ACCAACACTGGGCCCCAATCC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SSCGSAECAGEAIPHPPGLPKADPGHWWASFFFGKSTVPFMATVLESPERSEPPQASSGTITSDPAPEAVRKQPGGRPGKANVGPPS
S..G...CA..AIP..PGL.KAD.G.WWA.FFFGKST.PFMA.VLESPE.SE.PQASS..IT.D.A.EA.RKQP.G.PGK.N.GP.S
Retrocopy
STSGNISCASAAIPRHPGLAKADSGYWWARFFFGKSTLPFMAIVLESPEGSESPQASSSIITCDSALEALRKQPRGQPGKTNTGPQS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide