RetrogeneDB ID:
retro_mputfur_531
Organism:
Location:
GL896918.1:15525153-15525445 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
69.0 %
Coverage:
61.64 %
Frameshifts:
2
Stop codons:
0


Parental gene:
Parental gene symbol:
SNRPC
Parental gene aliases:
No gene alias available
Parental gene description:
small nuclear ribonucleoprotein polypeptide C [Source:HGNC Symbol;Acc:11157]

Genomic region (view in browser)





>retro_mputfur_531
ATACCTCTTACTCCATTCTGTGTTCTCCCTCCTGAAAGAGCAATGATCCCACCTCCCACC
AGTCTCCCAGTTCCTCCTTGTGCTGGTATGATGCCAGCACCCCATCATGGAGCCCTCCCA
TCATGCCAATGATGGGGTCTCCTATTCCTGGGATGATGCCAGTAGGACCTGCTCCTAGAA
CGAGGCCACCTATGGAGGGCTACAAAACACAGATGCCTAGCCCCCAATGATGAGAACTCC
CGCCCTTCCCATGATGGTGCCCATTCAGCCAGGAATGACCCCACCAGTCAGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
IPPTPFSAPPPAGAMIPPPPSLPGPPRPGMMPAPHMGG-PPMMPMMGPPPPGMMPVGPAPGMRPPMGGHMPMMPG-PPMMRPPARPMMVPTRPGMTRPDR
IP.TPF...PP..AMIPPP.SLP.PP..GMMPAPH.G..PP.MPMMG.P.PGMMPVGPAP..RPPM.G....MP..PPMMR.PA.PMMVP..PGMT.P.R
Retrocopy
IPLTPFCVLPPERAMIPPPTSLPVPPCAGMMPAPHHGA/PPIMPMMGSPIPGMMPVGPAPRTRPPMEGYKTQMPS/PPMMRTPALPMMVPIQPGMTPPVR


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide