RetrogeneDB ID:
retro_mputfur_533
Organism:
Location:
GL896918.1:2709870-2710184 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
76.64 %
Coverage:
54.92 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_533
GCTCCGAGGAGGCAAAGGTGCAACTATTTTCGGTCTTCCCAAAATCGGGTTCATCCAACA
CCTGCCACCTCCACCATGCCACCTAAGTTTGACCCCAAAGGGATCAAAGTCAAATACCTG
AGGTACACTGGTGGGGAAGTTCAAATCACCTCTGCCCTGGCTCTGAAGATTGCCCCAGGG
CTGTCTCCAAAAAAGGTTGGTGATGACATCATCAAGGCAGCTAGTGATAGGAAGGGCCTG
GAATTACAGTGAAACTGACCATTCAGAGCAGATAGGCCCAGGATGAAGTGGTACCTTCTG
CCTCTTCCCTGATT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
ARRRQRCNSLRSSRIRVHPTPATSAMPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLR-ITVKLTIQNRQAQIEVV
A.RRQRCN..RSS..RVHPTPATS.MPPKFDP..IKV.YLR.TGGEV..TSALA.KI.P.GLSPKKVGDDI.KA..D.KGL..ITVKLTIQ.R.AQ.EVV
Retrocopy
APRRQRCNYFRSSQNRVHPTPATSTMPPKFDPKGIKVKYLRYTGGEVQITSALALKIAP-GLSPKKVGDDIIKAASDRKGLE/ITVKLTIQSR*AQDEVV


Parental protein
PSASALI
PSAS.LI
Retrocopy
PSASSLI


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide