RetrogeneDB ID:
retro_mputfur_534
Organism:
Location:
GL896918.1:3678635-3678965 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
74.14 %
Coverage:
58.55 %
Frameshifts:
3
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_534
AAAGGTCCGAGGGTTACAGTGAAACTGACTATTCAGAACAGATAGGCCCAGTTGAAGTGG
TAACTTGTGCCTCTTCCCTGATTATCAAACCCTCATGGAACCACCAGGAGATGGGAAGAA
GCAGAAAAACATTAAACATGGTAGAAATGTCACTTTTATGAGATTATCAACATTGCCCAA
CAGATGCAGCACCAATCTTTAGCCAGAGAACTCTCTGGAACCATTAAAGAGATCCTGGTG
ACTGCCCAATCTGTGGGCTGCAATGTTGATGGCCACCACCCTCATGACATCATAGTTAAC
ATCAATAGTGGTACAGTGGAATGCCCAGCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KGLRITVKLTIQNRQAQ-IEVVPSASALIIK-ALKEPPRDRKKQKNSAVKHSGNITFD-EIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHP
KG.R.TVKLTIQNR.AQ..EVV..AS.LIIK..L.EPP.D.KKQKN...KH..N.TF..EI.NIA.QM.H.SLARELSGTIKEIL.TAQSVGCNVDG.HP
Retrocopy
KGPRVTVKLTIQNR*AQ/VEVVTCASSLIIK/TLMEPPGDGKKQKN--IKHGRNVTFM/EIINIAQQMQHQSLARELSGTIKEILVTAQSVGCNVDGHHP


Parental protein
HDIIDDINSGAVECPA
HDII..INSG.VECPA
Retrocopy
HDIIVNINSGTVECPA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide