RetrogeneDB ID:
retro_mputfur_535
Organism:
Location:
GL896918.1:4363846-4364403 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
94.65 %
Coverage:
64.81 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_535
CCAACAGCTCCTGCTTATCCTGGACGACCTGCACCAGGAGCCCACCCTGGGCAACCGAGT
GGGCCTGGGGCCTACCCGCCTCCTGGACAGCCAAGTGCTCCTGGAGCCCAGCCCCCTGCT
GGCGCCTTTGGCATCCCTGCTAGACCACTGACTGTACCTTATGACCTGCCCTTGCCTGGA
GGAGTCATGCCTCGCATCTGATAACAATTCTGGGCACAACGAAGCCCAATGCAAACAGAT
TTGCTTTAGATTTCAAGAGAGGGAATGATGTTGCTTTCCACTTTAACCCACGCTTCAATG
AGGACAACAAGAGAGTCATTGTTTGCAATACAAAGCTGGATAACATCTGGGGAAAGGAAG
AAAGACAGGCGACTTTCCCATTCGAAAGTGGTAAACCATTCAAAATACAAGTGCTGGTTG
AATCTGACCACTTCAAGGTTGTGGTCAATGATGCTCACTTGTTGCAGTACAATCATTGGA
TGAAAAATCTCCAGGAAATCAGCAAACTGGGAATTTCTGGTGACATAGATCTCACCAGTG
CTTCACATGTTATGATA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
PTAPAYPGPPAPGAYPGQPSGPGAYPPPGQPSAPGAQPAAGAFGIPAGPLTVPYDLPLPGGVMPRM-LITILGTTKPNANRFALDFKRGNDVAFHFNPRF
PTAPAYPG.PAPGA.PGQPSGPGAYPPPGQPSAPGAQP.AGAFGIPA.PLTVPYDLPLPGGVMPR..LITILGTTKPNANRFALDFKRGNDVAFHFNPRF
Retrocopy
PTAPAYPGRPAPGAHPGQPSGPGAYPPPGQPSAPGAQPPAGAFGIPARPLTVPYDLPLPGGVMPRI/LITILGTTKPNANRFALDFKRGNDVAFHFNPRF


Parental protein
NEDNKRVIVCNTKLDNLWGKEERQATFPFETGKPFKIQVLVESDHFKVAVNDAHLLQYNHRMKNLQEISKLGISGDIDLTSASHVMI
NEDNKRVIVCNTKLDN.WGKEERQATFPFE.GKPFKIQVLVESDHFKV.VNDAHLLQYNH.MKNLQEISKLGISGDIDLTSASHVMI
Retrocopy
NEDNKRVIVCNTKLDNIWGKEERQATFPFESGKPFKIQVLVESDHFKVVVNDAHLLQYNHWMKNLQEISKLGISGDIDLTSASHVMI


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide