RetrogeneDB ID:
retro_mputfur_536
Organism:
Location:
GL896918.1:6376900-6377456 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
73.12 %
Coverage:
100.0 %
Frameshifts:
1
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_536
AAAATGGTTTGTTATTTGCTCAGCCCAGAAAACTGTACAAAATCATGCAAATCAAGAGGT
TCAAATCTTCATGTTCACTTTAAGAACACACATGAAACTGCCCAGGCCATCTAGGGTGTG
CATATCTGGAATGCCACTAGGTACAGGAAGGATGTCACTTTGCAGAAGCAATGCGTGCCA
ATTCCATCATGACAATGGTGGAGTTGGTCCGTGTGGCCGGGACAAACAGTGGGGATGTAC
ACAGGGTCGGTGGCCCAAAGAGAGTGCTGAATTTTTCCTGCCCATGCTTAAAAATACGGG
GAGTCATGCTGACCTGAAGGGTTTAGATGCAGATTCTCTGGTCATGGAGCATAACCTGGT
CAAGAAAGTGCCTGAGACTCGGTGTGGAACTTACAGGGCCTGAGGCCCAATTAACCCACA
CATGCTCTCTCCCTGCTGCACCGAGATGATCCCCACTGAAAAGGAGCAGATTGTTCCTAA
ACCAGAACAGGAGTTTGCCCAGGAGGAAAAGATATCCCAGAAGAAACTGAAGAAACAAAA
CCTTATGGCCCGGGAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KMVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVP-FRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNA
KMV.Y.L.PEN.TKSCKSRGSNL.VHFKNT.ETAQAI.G.HI..AT.Y.KDVTLQKQCVP.F...NGGVG.C...KQWG.TQGRWPK.SAEF.L.MLKN.
Retrocopy
KMVCYLLSPENCTKSCKSRGSNLHVHFKNTHETAQAI*GVHIWNATRYRKDVTLQKQCVP\FHHDNGGVGPCGRDKQWGCTQGRWPKESAEFFLPMLKNT


Parental protein
ESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKKISQKKLKKQKLMARE
.S.A.LKGLD.DSLV.EH..V.K.P..R..TYRA.G.INP.M.SPC..EMI.TEKEQIVPKPE.E.AQ..KISQKKLKKQ.LMARE
Retrocopy
GSHADLKGLDADSLVMEHNLVKKVPETRCGTYRA*GPINPHMLSPCCTEMIPTEKEQIVPKPEQEFAQEEKISQKKLKKQNLMARE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide