RetrogeneDB ID:
retro_mputfur_537
Organism:
Location:
GL896918.1:7542824-7543304 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
80.62 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_537
ATATGCTCCCACTTCAGCTCCGATGAAATTAAAAGGCTGAGCAAGAGGTTTAAGAAGCTG
GACTTGGACCGTTCAGGCTCTCTGAGCGTGGAGGAGTTCGTGTCCCTGCCCGAGCTGCAC
CAGAACCCGTTGGTGCAGCGAGTGGTCGACGTCTTCGACACCGACGGCAATGGAGAAGTG
AACTTCAAGGAGTTCATCCTGGGGACCTCCCAGTTCAGCGTCAGGGGGGACGAGGAGGAG
AAGTTGAGGTTTGCGTTCAGCATCTATGACATTGATAAAGATGGCTACATTTCCAACGGG
GAGCTCTTCCAGGTGCTGAAGCTGATGGTGGGCGACAACCTGGAGGACTGGCAGTTACAG
CAGTTAGTGGACAAAACCATCATCGTCCTGGATCGGGATGGAGACGGGAAAATATCCTTT
GAGGAGTTCAGCGCTGTGGTTAGAGGCCTGGATGTCCACAAGAAGTTGGTGGTGATTGTG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNG
.CSHF..DEIKRL.KRFKKLDLD.SGSLSVEEF.SLPEL.QNPLVQRV.D.FDTDGNGEV.FKEFI.G.SQFSV.GD.E.KLRFAF.IYD.DKDGYISNG
Retrocopy
ICSHFSSDEIKRLSKRFKKLDLDRSGSLSVEEFVSLPELHQNPLVQRVVDVFDTDGNGEVNFKEFILGTSQFSVRGDEEEKLRFAFSIYDIDKDGYISNG


Parental protein
ELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMVVDV
ELFQVLK.MVG.NL.D.QLQQ.VDKTII..D.DGDG.ISFEEF.AVV.GLD.HKK.VV.V
Retrocopy
ELFQVLKLMVGDNLEDWQLQQLVDKTIIVLDRDGDGKISFEEFSAVVRGLDVHKKLVVIV


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide