RetrogeneDB ID:
retro_mputfur_54
Organism:
Location:
GL897264.1:339960-340602 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
91.12 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
RPL10
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L10 [Source:HGNC Symbol;Acc:10298]

Genomic region (view in browser)





>retro_mputfur_54
ATGGGCCGCTCCCCTGCCTGGTGTTACCGGTATTGCAAGAACAAGCCGTATCCCAAATCT
CACTTCTGCAGAGGTGTCCCTGATGCCAAGATTCGCATCTCTGACCTGGGGCGGAAGAAG
GCAAAAGTAGATGAGTTCCCTCTATGCGGCCACATGGTGTCCAATGAATATGAGCAGCTC
TACTCTGAAGCCCTGGAGGCTGCCCATATTTGTGCCAACAAATACATGGTGAAAAGCTGT
GGCAAAGATGGTTTTCACATCCGAGTGCGGCTCCATCCCTTCTATGTCATCCACATTAAC
AAGATGTCCTGTGCTGGAGTGGACAGGCTGCAGACAGGTATGCGGGGTGCTTTTGGAAAG
TCCCAGGGCACAGTAGCCAGGGTCCACATTGGCCGAGTCATCATGTCCATCCGTACCAGG
CTGCAGAACAAGGAACATGTGATTGAGGCCCTACGCAGGGCCCAGTTCAAGTTCCCTGGC
CGCCAAAAGATCCACATCTCCAAGAAGTGGGGCTTTACTAAGTTCAATGTGGATGAATTT
GAAGACATGGTGGCTGAAAAGTGGCTTATCCCAGATAGCTGTGGGGTCAAATACATCCCT
AACCATGGTCCCTTGGACAAATGGAGGGCTCTGCACTCATGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRIN
MGR.PA.CYRYCKNKPYPKS.FCRGVPDAKIRI.DLGRKKAKVDEFPLCGHMVS.EYEQL.SEALEAA.ICANKYMVKSCGKDGFHIRVRLHPF.VI.IN
Retrocopy
MGRSPAWCYRYCKNKPYPKSHFCRGVPDAKIRISDLGRKKAKVDEFPLCGHMVSNEYEQLYSEALEAAHICANKYMVKSCGKDGFHIRVRLHPFYVIHIN


Parental protein
KMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYI
KM.SCAG.DRLQTGMRGAFGK.QGTVARVHIG.VIMSIRT.LQNKEHVIEALRRA.FKFPGRQKIHISKKWGFTKFN.DEFEDMVAEK.LIPD.CGVKYI
Retrocopy
KM-SCAGVDRLQTGMRGAFGKSQGTVARVHIGRVIMSIRTRLQNKEHVIEALRRAQFKFPGRQKIHISKKWGFTKFNVDEFEDMVAEKWLIPDSCGVKYI


Parental protein
PNRGPLDKWRALHS
PN.GPLDKWRALHS
Retrocopy
PNHGPLDKWRALHS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide