RetrogeneDB ID:
retro_mputfur_543
Organism:
Location:
GL896918.1:15013527-15014021 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
78.31 %
Coverage:
56.51 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
ESD
Parental gene aliases:
No gene alias available
Parental gene description:
esterase D [Source:HGNC Symbol;Acc:3465]

Genomic region (view in browser)





>retro_mputfur_543
TACAGAATGTATTCTTATGTAACTAGGGCGCTTCCCCAACTTATAAATGCCAGTTTTCCA
CTGGACCCCCAAAAGATGTCTATCTTTGGCCACTCCGTGAGAGGCCATGAAACTTTGATT
TGTGCTCTGAAGAATCCTGGAAAATACAAATCTGTATCTGCCTTTGCTCCAATTTGCAAC
CCAGTGCTCTGTCTTTGGGACAAAAAATCCTTTAGTAGATATTTAGGGACAGGTCAAAAT
AAATGGAAGACTTATGATGCTACCCAGCTTGTAAGGTCCTACCCAGGTGCTCAGCTAGAC
ATAATAATTGATGAAGGAAAAGATAACCAGTTCCTTCCAGATGGACAGTCACTACTTGGT
AACTTCATAGCTGCCTGCACAGAAAAGAAAGTCCCTGTTGTTTTTAGGTTTAAGAGGGTT
ATGATGATAGCTACAGCTTCATTGAAACCTTTATTCCTGATCACATCAGAGATCATGCAA
AATACCCAAATGCA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
YRMYSYVTEELPRLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLD
YRMYSYVT..LP.LINA.FP.DPQ.MSIFGHS..GH..LICALKNPGKYKSVSAFAPICNPVLC.W.KK.FS.YLGT.Q.KWK.YDAT.LV.SYPG.QLD
Retrocopy
YRMYSYVTRALPQLINASFPLDPQKMSIFGHSVRGHETLICALKNPGKYKSVSAFAPICNPVLCLWDKKSFSRYLGTGQNKWKTYDATQLVRSYPGAQLD


Parental protein
ILIDQGKDDQFLTDGQLLPDNFIAACTEKKVPVVFRLQ-EGYDHSYYFIATFITDHIRHHAKYLNA
I.ID.GKD.QFL.DGQ.L..NFIAACTEKKVPVVFR...EGYD.SY.FI.TFI.DHIR.HAKY.NA
Retrocopy
IIIDEGKDNQFLPDGQSLLGNFIAACTEKKVPVVFRFK/EGYDDSYSFIETFIPDHIRDHAKYPNA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide