RetrogeneDB ID:
retro_mputfur_544
Organism:
Location:
GL896918.1:16820220-16820536 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
78.9 %
Coverage:
55.96 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_544
GTAGCCATGGCGAGTGGTGACTGGAAGAGTCTTGAGGATTCCAGTGAAACTGACCATTCA
GAACAGACAGGCCCAGATTGAAGTGGTACCTTCTGCCTCTGCCCAGATTATCAAAGCCCT
CAAGGAACCACCAAGAGACAGAAAGAAGCAGAAAAACATGAAGCACCGTGGAAATATCAC
TTTGGATGAGATTGGCAATATTGCCCGACAGATGCGCCACTGATCTTTAGTTAGAGAACT
CTCTGGAACCATTAAAGAGGTTCTGAGAACTGCCCAGTCTTCTGGTTGCAGTGATGGCCA
CCACGCTGATGACATC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
IAKATGDWKGL-RITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNSAVKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCN
.A.A.GDWK.L.RI.VKLTIQNRQAQIEVVPSASA.IIKALKEPPRDRKKQKN...KH.GNIT.DEI.NIARQMRH.SL.RELSGTIKE.L.TAQS.GC.
Retrocopy
VAMASGDWKSL\RIPVKLTIQNRQAQIEVVPSASAQIIKALKEPPRDRKKQKN--MKHRGNITLDEIGNIARQMRH*SLVRELSGTIKEVLRTAQSSGCS


Parental protein
VDGRHPHDI
.DG.H..DI
Retrocopy
-DGHHADDI


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide