RetrogeneDB ID:
retro_mputfur_552
Organism:
Location:
GL896919.1:1665705-1666099 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
57.58 %
Coverage:
75.72 %
Frameshifts:
1
Stop codons:
4


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_552
CTTTCTGAAACCATCAGTGCTTCACAAGAACGTCTAGTGGAAAAGATTTTCAGTCCAAGT
AGAGTCCTCCTTCCGGGGTTCGAACGGGAGATCAAAATCCTGCTCTGGATGAAAGGACCC
AACTCCAAGAGCAACTTTGAACTCTCCATCATGGGGAAATGCTGGTGCCAGGCAAAGTGC
CAAAAGGCTGACTCGCATTTTGGCTTCAAAACCCTGATAGAAAGGATGTGGAGGCACTGT
AATCCTTAGCCTTGAAACCATGAATTCTCTTAAAAGAGAGAATATTCATTCTGGTGTCTT
CCTCTGAACCATAGGGATGAGCAGCCTGAAAGAAGCCATGCAGTCACTGAAAATAGGTTA
GGTGACTGTCCAGGAACCTGTTACCACAATAGTG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
LKPSVLNVEARLLEKIFGPSRVLLPGFEREFKVVLQMRKPNSEGKVEIFILGR-RRYRKRAKRLIRILTTKPRRKSCEGTMMLSLETMKSLEKENVHSSA
L.........RL.EKIF.PSRVLLPGFERE.K..L.M..PNS....E..I.G.....R..AKRL.RIL..KP..K.C.GT..LSLETM.SL..EN.HS..
Retrocopy
LSETISASQERLVEKIFSPSRVLLPGFEREIKILLWMKGPNSKSNFELSIMGK\AGARQSAKRLTRILASKP**KGCGGTVILSLETMNSLKRENIHSGV


Parental protein
FLSTTVMNSLDEAMQSLEIGQETVQEPVTKTV
FL.T..M.SL.EAMQSL.IG..TVQEPVT..V
Retrocopy
FL*TIGMSSLKEAMQSLKIG*VTVQEPVTTIV


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide