RetrogeneDB ID:
retro_mputfur_554
Organism:
Location:
GL896919.1:8293194-8293530 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
98.21 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
CHURC1
Parental gene aliases:
No gene alias available
Parental gene description:
churchill domain containing 1 [Source:HGNC Symbol;Acc:20099]

Genomic region (view in browser)





>retro_mputfur_554
ATGTGTGGGGGCTGTGTGGAGAAGGAGTATCCGAATCGGGGTAACATCTGCCTGGAAAAT
GGATCTTTCTTGCTGAACTTTACAGGCTGTGCAGTGTGTAGTAAGCGGGATTTTATGCTG
ATCACCAACAAATCTTTGAAAGAGGAAGATGGAGAAGAAATAGTTACCTATGATCATCTG
TGTAAGAATTGTCATCATGTAATAGCCAGGCACGAGTACACAATCAGTATCATGGATGAA
TTTCAGGAGTATACCATGCTCTGTCTGTTATGTGGCAAAGCTGAAGATACTATCAGTATT
CTCCCCAGTGACCCTCGACAAATGACTCTGTTATTC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MCGGCVEKEYPNRGNICLENGSFLLNFTGCAVCSKRDFMLITNKSLKEEDGEEIVTYDHLCKNCHHVIARHEYTFSIMDEFQEYTMLCLLCGKAEDTISI
MCGGCVEKEYPNRGNICLENGSFLLNFTGCAVCSKRDFMLITNKSLKEEDGEEIVTYDHLCKNCHHVIARHEYT.SIMDEFQEYTMLCLLCGKAEDTISI
Retrocopy
MCGGCVEKEYPNRGNICLENGSFLLNFTGCAVCSKRDFMLITNKSLKEEDGEEIVTYDHLCKNCHHVIARHEYTISIMDEFQEYTMLCLLCGKAEDTISI


Parental protein
LPDDPRQMTLLF
LP.DPRQMTLLF
Retrocopy
LPSDPRQMTLLF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide