RetrogeneDB ID:
retro_mputfur_556
Organism:
Location:
GL896919.1:15486702-15487457 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
68.08 %
Coverage:
50.39 %
Frameshifts:
3
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_556
AGCTACTGGGGTGGCCTTGGCACCAGCACGAGTGTGATTGGGGGTTATGGCAGGGTGGGG
GTATGGGGTATAGCTGTCTCTGAATCTGAGACTGCTGAGACCCCTTAAGCTGGGGGTATA
CCCCAACGTTCAAGCTGTGCACACCCCGGAGATGGAGGAGATAAAGACCCCCAACAAGTT
TGCTTCCTTCATCGACAAGATGCAGCACCTGGAGCAGCAGAACAAAATTCTGGAGACCAA
GTGAAGCCTCCTACAGCAGCAGAAGACAGCTCAGAGCAACATGGGCAGAGCGTTCGAGAG
CTCCATCAACCACCTTCCAGGGCAACCGGACACACAGGGCCAGGAGAAGCTTCATCTGGA
GGTGGAGCTTGGCAACATTCATGGGCTGGTGGAGGACTTCAGGAATGAGTACAAGGAGGA
GATCAAAGAGCACGCAGACATGGAGAATGAATTTGTCCTCATCAAGAAGGATGTGGATAA
AGCTTTCATGAATGAAGTAGAGCTGGAGTCCCTCCTGGAAAGCCTGACCGACAAGATCAG
CTTCTTAAGGCAGCTATAGCAGGGGAAATTTGTGAGATGCAATCTCAGATCTCTGACACG
TTTGTGGTATTGTCCATGGACAACAGTTGCTCCCTGAACCTTGATAACATCATTGCCAAG
GTCAAAGCCCTGTACAAGGGCATTGCCAACTACAGCCAAGCTGAGGTCAGATCATGTACC
AGATCAAGTATGAGGAGCTGTAGACATTGGCTGGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SFRGGLNSSMSVVGGYGGGAG-GMGGITAVSVNQSLLSPLKLEVDPNIQAVRTQEKEQIKTLNNKFASFIDKVRHLEQQNKVLETKWSLLQQQKTARSNI
S..GGL..S.SV.....GG.G.G.G.....S.N..LL.PLKL.V.PN.QAV.T.E.E.IKT..NKFASFIDK..HLEQQNK.LETK.SLLQQQKTA.SN.
Retrocopy
SYWGGLGTSTSVI----GGYG\GWGYGV*LSLNLRLLRPLKLGVYPNVQAVHTPEMEEIKT-PNKFASFIDKMQHLEQQNKILETK*SLLQQQKTAQSNM


Parental protein
DNMFESYISNLRRQLDTLGQEKLKLEVELGNMQGLVEDFKNKYEEEIKERADMENEFVLIKKDVDEAYMNKVELESRLEGLTDEINFLRQL-YEEEIREL
...FES.I..L..Q.DT.GQEKL.LEVELGN..GLVEDF.N.Y.EEIKE.ADMENEFVLIKKDVD.A.MN.VELES.LE.LTD.I.FLRQL....EI.E.
Retrocopy
GRAFESSINHLPGQPDTQGQEKLHLEVELGNIHGLVEDFRNEYKEEIKEHADMENEFVLIKKDVDKAFMNEVELESLLESLTDKISFLRQL/IAGEICEM


Parental protein
QSQISDTSVVLSMDNSRSLDLDGIISEVKAQYEDIANRSRAE-AETMYQIKYEELQTLAG
QSQISDT.VVLSMDNS.SL.LD.II..VKA.Y..IAN.S.AE....MYQIKYEEL.TLAG
Retrocopy
QSQISDTFVVLSMDNSCSLNLDNIIAKVKALYKGIANYSQAE/GQIMYQIKYEEL*TLAG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide