RetrogeneDB ID:
retro_mputfur_564
Organism:
Location:
GL896920.1:10472341-10472565 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
69.74 %
Coverage:
60.98 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
TXNDC17
Parental gene aliases:
No gene alias available
Parental gene description:
thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:28218]

Genomic region (view in browser)





>retro_mputfur_564
CAGGCTGAACCAGTTGTACAAGACAGGCTGAAGCAGGTTCGTGAAGGATGTGAGTTCATT
TACTGCGAACGAGGAGAAAAACCTTTTTGGAAAGAGTCATGTAATGACTTCAGAAAAAAC
TTGAAAGTGACTGCATTGCCTCTACTGCATAACTATGGAACACCTAAAGACTGGTGGAAT
CTGAGTGTCTTCAGACCAACCTCCTGGAGGCATTGTTCTCTGAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
QAEPVVREGLKHMSEGCVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYGTPQ-KLVESECLQANLVEMLFSE
QAEPVV...LK...EGC.FIYC..GEKP.WK...NDFRKNLKVTA.P.L..YGTP...LVESECLQ.NL.E.LFSE
Retrocopy
QAEPVVQDRLKQVREGCEFIYCERGEKPFWKESCNDFRKNLKVTALPLLHNYGTPK/RLVESECLQTNLLEALFSE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide