RetrogeneDB ID:
retro_mputfur_568
Organism:
Location:
GL896921.1:7407911-7408424 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
96.49 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
C1orf194
Parental gene aliases:
No gene alias available
Parental gene description:
chromosome 1 open reading frame 194 [Source:HGNC Symbol;Acc:32331]

Genomic region (view in browser)





>retro_mputfur_568
ATGCCTTTCACCCGAGACCCTTTCCAGCACCCTACGTTGGATAACGATGAGACCTACCTG
GGAAAACTCCAGGCTTCCAAGAAACTGCCATATAAGAACCCAGCTCACCTTGCTCAGCAA
CAGGAACCCTGGAGTCGGCTCAGCTCAACTCCCACAATCACCTCCATGAGGTGGGATGTT
TATTTTTTTGATCCTGAGATACCAAAGGATGACCTGGATTTTCGCTTAGCAGCCTTGTAC
AACCACCACACAGGGACATTCAAGAACAAAAGTGAGATACTCTTACACCAGGAGACTACC
CAGGATACCCATGAAATCATCAAGACCCAATTCCCTGGAGAACTTTTACCCCCTCCTCCA
CGACCTTCCATCACTTCCCGGTCTAACATCAGATACTGAATCAACCCTAAGAAGGAGTCT
ATCCACAGCATCCAGGGATCCATAGTGTCCCCTCACACTGCAGCCACCAATGGAGGCTAC
TCCCAAAAGACTGATGGTGGCTTCTTCTCTACC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MPFTRDPFQHPTLDNDETYLGKLRASKKLPYKNPAHLAQQQEPWSRLSSTPTITSMRRDVYFFDPEIPKDDLDFRLAALYNHHTGTFKNKSEILLHQETT
MPFTRDPFQHPTLDNDETYLGKL.ASKKLPYKNPAHLAQQQEPWSRLSSTPTITSMR.DVYFFDPEIPKDDLDFRLAALYNHHTGTFKNKSEILLHQETT
Retrocopy
MPFTRDPFQHPTLDNDETYLGKLQASKKLPYKNPAHLAQQQEPWSRLSSTPTITSMRWDVYFFDPEIPKDDLDFRLAALYNHHTGTFKNKSEILLHQETT


Parental protein
QDTHGIIKTQFPGELLPPPPPPSITSRSNIRYWINPKKESIHSIQGSIVSPHTAATNGGYSRKTDGGFFST
QDTH.IIKTQFPGELLPPPP.PSITSRSNIRY.INPKKESIHSIQGSIVSPHTAATNGGYS.KTDGGFFST
Retrocopy
QDTHEIIKTQFPGELLPPPPRPSITSRSNIRY*INPKKESIHSIQGSIVSPHTAATNGGYSQKTDGGFFST


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide