RetrogeneDB ID:
retro_mputfur_57
Organism:
Location:
GL896907.1:7479160-7479565 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
95.52 %
Coverage:
96.4 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
Rps17
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S17 [Source:MGI Symbol;Acc:MGI:1309526]

Genomic region (view in browser)





>retro_mputfur_57
ATGGGCCGCGTCCGCACCAAAACCGTGAAGAAGGCGGCCCGGGTCATCATCGAGAAGTAC
TACACGCGCCTGGGCAACGATTTCCACACCAACAAGCGCATGTGCGAGGAAATCGCCATC
ATCCCCAGCAAGAAGCTCCGCAAGATTGCAGGCTACGTCACGCACCTGATGAAGCACATT
CAGAGGGGCCCGGTGAGGGGCATCTCCATCGAGCTGCAGGAGGAGGAGCGAGAACGGAGG
GACAACTATGTGCCCGAGGTCTCGGCCCTGGATCAGCAGATCATTGAAGTGGATCCTGAC
ACTAAGGAAATGTTGAAACTCTTGGACTTTGGCAGCCTGTCCAACCTGCAGGTCACTCAG
CCTACAGTCGGGATGAATTTCAAAACATCACGTGGAGCCGTTTGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPD
GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKR.CEEIAIIPSKKLR.KIAGYVTHLMK.IQRGPVRGISI.LQEEERERRDNYVPEVSALDQ.IIEVDPD
Retrocopy
GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRMCEEIAIIPSKKLR-KIAGYVTHLMKHIQRGPVRGISIELQEEERERRDNYVPEVSALDQQIIEVDPD


Parental protein
TKEMLKLLDFGSLSNLQVTQPTVGMNFKTPRGAV
TKEMLKLLDFGSLSNLQVTQPTVGMNFKT.RGAV
Retrocopy
TKEMLKLLDFGSLSNLQVTQPTVGMNFKTSRGAV


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide