RetrogeneDB ID:
retro_mputfur_578
Organism:
Location:
GL896922.1:8898437-8898822 (-)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
66.67 %
Coverage:
99.22 %
Frameshifts:
2
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_578
ATGGTGCCTGTGAAAAAACTTGTGGCAAAGGGGGGCAAAAAAACCCCGAGCAGGTTCTGA
AGTTTACCCTTGACCGCCCCCGCTCTGTAGAAGATGGAATCACGGACGCTGCCAATGTTG
AGCCGTTTCTTCAAGAGAGGATCCCAGGGCATGGCAAACCTGGGAATCTCGGTGGAAGGG
TTGTAACCACTGAAAGGAACAAGAGCAGGATCGCTGTAACTTCTGAGCTGCTTTTTTCCC
CCAAAAGATCTTTGAAACCTCTCACCAAACACTATTTGAAGGAGAGTCCACGTGATTGGC
TGTGCACAGCTACTAACCGCAAGGAGAACCAGGACTGGTGTTACTTCCAGATTAACCAGG
ATGAGGAAGGCGAGGAGATGAGGAT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAPVKKLVAKG-GKKK-KQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFS-KRYLKYLTKKYLKKNNLR
M.PVKKLVAKG.G.K...QVLKFTLD....VEDGI.DAAN.E.FLQERI...GK.GNLGG.VVT.ER.KS.I.VTSE..FS.KR.LK.LTK.YLK....R
Retrocopy
MVPVKKLVAKG/GQKNPEQVLKFTLDRPRSVEDGITDAANVEPFLQERIPGHGKPGNLGGRVVTTERNKSRIAVTSELLFSPKRSLKPLTKHYLKESP-R


Parental protein
DWLRVVANSKESYELRYFQINQDEEEEE-DED
DWL....N.KE.....YFQINQDEE.EE.DED
Retrocopy
DWLCTATNRKENQDWCYFQINQDEEGEE/DED


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide