RetrogeneDB ID:
retro_mputfur_58
Organism:
Location:
GL896967.1:2502650-2503922 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
96.96 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_58
ATGGCGCTCCGGGCCACCAGGAACGCAAAAGTTAATGTGGAAAATAAGGCGAAGATCAGC
ATGGCAGGCGCAAAGCGCGTGCCTCTGGCCATGATTGCGGCCTCCAAGCCCGGGCTGAGG
CCGAGAACAGCCCTCGGAGACATTGGTAACAAAGTCAGCGAACAACCACAGGCCAAACTG
CCTCTGAAAAAGGAAGCAAAAACTTTGGTTCCTGGAAAAGTTATTGCTAAAAAATTACCT
AAACCTCTGGAGAAGGCACCCGAGCCTGTGCCAGAACCTGAGCCAGAACCTGAGCCCGTT
AAAGAAGAAAAACTTTCGCCTGAGCCTATTTTGGTTGATACTCCCTCTCCAAGCCCAATG
GAAACATCTGGATGTGCCCCTGCAGAAGAATATCTGTGTCAGGCATTCTCTGATGTAATT
CTTGCAGTGAATGATGTGGATGCCAAAGATGGAGCTGATCCAAACCTTTGTAGTGAATAT
GTGAAAGATATTTATGCTTATCTGAGACAACTTGAGGAAGAGCAAGCCATCAGACCAAAA
TACCTACTGGGTCGTGAAGTCACTGGAAACATGAGAGCTATCCTTATTGACTGGCTAGTA
CAGGTTCAGATGAAGTTCAGGTTACTTCAGGAGACCATGTACATGACTGTTTCCATTATT
GATCGGTTCATGCAGAATAATTGTGTGCCCAAGAAGATGCTGCAGCTGGTTGGTGTCACT
GCCATGTTTATTGCAAGCAAATATGAAGAAATGTACCCTCCAGAAATTGGTGACTTTGCC
TTTGTGACTGACAACACTTATACTAAGCACCAAATCAGACAGATGGAAATGAAGATTCTA
ATATCTTTAAATTTTGGTCTGGGCCGCCCTCTACCCCTGCATTTCCTTTGGAGAGCATCT
AAGATCGGAGAGGTTGATGTTGAGCAACATACTTTGGCCAAATACCTGATGGAACTAACT
ATGTTGGACTACGATATGGTGCACTTTCCTCCTTCTCAGATTGCAGCAGGAGCTTTTTGC
TTAGCACTGAAAATTCTTGAAAACGGTGAATGGACACCAACTCTACAGCATTATCTATCA
TACACTGAAGAATCCCTTCTAAGTGTTATGCAACAACTAGCTAAGAATATAGTCATGGTG
AATCGTGGACTTACAAAGCACATGACCATCAAGAACAAGTATGCCACATCTAAGCACGCA
AAGATCAGCACGCTGGCACAGCTAAATTCTGCACTAGTTCAAGATTTAGCCAAGGCTGTG
GCAAAGGTGTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MALRVTRNAKVNVENKAKISMAGAKRVPLATTAASKPGLRPRTALGDIGNKVSEQPQAKLPLKKEAKTLVPGKVIAKKLPKPLEKAPEPVPEPEPEPEPE
MALR.TRNAKVNVENKAKISMAGAKRVPLA..AASKPGLRPRTALGDIGNKVSEQPQAKLPLKKEAKTLVPGKVIAKKLPKPLEKAPEPV....PEPEPE
Retrocopy
MALRATRNAKVNVENKAKISMAGAKRVPLAMIAASKPGLRPRTALGDIGNKVSEQPQAKLPLKKEAKTLVPGKVIAKKLPKPLEKAPEPV----PEPEPE


Parental protein
PEPVKEEKLSPEPILVDTPSPSPMETSGCAPAEEYLCQAFSDVILAVNDVDAEDGADPNLCSEYVKDIYAYLRQLEEEQAIRPKYLLGREVTGNMRAILI
PEPVKEEKLSPEPILVDTPSPSPMETSGCAPAEEYLCQAFSDVILAVNDVDA.DGADPNLCSEYVKDIYAYLRQLEEEQAIRPKYLLGREVTGNMRAILI
Retrocopy
PEPVKEEKLSPEPILVDTPSPSPMETSGCAPAEEYLCQAFSDVILAVNDVDAKDGADPNLCSEYVKDIYAYLRQLEEEQAIRPKYLLGREVTGNMRAILI


Parental protein
DW-VQVQMKFRLLQETMYMTVSIIDRFMQNNCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTDNTYTKHQIRQMEMKILRSLNFGLGRPLPLHFL
DW.VQVQMKFRLLQETMYMTVSIIDRFMQNNCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTDNTYTKHQIRQMEMKIL.SLNFGLGRPLPLHFL
Retrocopy
DWLVQVQMKFRLLQETMYMTVSIIDRFMQNNCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTDNTYTKHQIRQMEMKILISLNFGLGRPLPLHFL


Parental protein
RRASKIGEVDVEQHTLAKYLMELTMLDYDMVHFPPSQIAAGAFCLALKILDNGEWTPTLQHYLSYTEESLLSVMQHLAKNIVMVNRGLTKHMTIKNKYAT
.RASKIGEVDVEQHTLAKYLMELTMLDYDMVHFPPSQIAAGAFCLALKIL.NGEWTPTLQHYLSYTEESLLSVMQ.LAKNIVMVNRGLTKHMTIKNKYAT
Retrocopy
WRASKIGEVDVEQHTLAKYLMELTMLDYDMVHFPPSQIAAGAFCLALKILENGEWTPTLQHYLSYTEESLLSVMQQLAKNIVMVNRGLTKHMTIKNKYAT


Parental protein
SKHAKISTLAQLNSALVQDLAKAVAKV
SKHAKISTLAQLNSALVQDLAKAVAKV
Retrocopy
SKHAKISTLAQLNSALVQDLAKAVAKV


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide