RetrogeneDB ID:
retro_mputfur_589
Organism:
Location:
GL896923.1:5590340-5590585 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
59.04 %
Coverage:
63.08 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
RPS15A
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S15a [Source:HGNC Symbol;Acc:10389]

Genomic region (view in browser)





>retro_mputfur_589
GTGCTCCAAAGGCATTTCACACCGATGCTGAAGCATGCTTACACTGGTCAATGTGAAACC
ATTAATTATCACAGAGCTGGCGGAATTGCTGTGAACCTGCACTCAGGTTAAACAAGTGTG
GAGTGATTGACCCCAGATTTGGTATACAAGTCAACGATCTACAAAAATGACAGCACAATT
TGCTCTCATCCCATCAGTTTGGTTTCACCATGCTGGTGACCTCAGCTGGCATCAAAGAAC
AAGAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
VIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTG-RLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHE
V..R..T.M.KH.Y.G..E.I..HRAG.I.VNL...RLNKCGVI.PRF..Q..DL.K.Q.NLL.S.QFGF..L.TSAGI...E
Retrocopy
VLQRHFTPMLKHAYTGQCETINYHRAGGIAVNLHS/RLNKCGVIDPRFGIQVNDLQK*QHNLLSSHQFGFTMLVTSAGIKEQE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide