RetrogeneDB ID:
retro_mputfur_594
Organism:
Location:
GL896923.1:15039691-15040088 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
75.18 %
Coverage:
69.43 %
Frameshifts:
3
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_594
GGTGGGGCAGTTAGTGCCACATCTGCCCTGGCCCCAAAGATCTCCCCCCTGGGTCTGTCT
CCAAAAAAAGGTTGGTGATGACATCGCCAAGGGAACTGGTGTTTGGAAGAAGCTGAGGAT
TATGGTGAAATTGATCATTCATAACACACAGGCCCACATGAAGTGGTACTTTCTGCCTCT
GCCCTGACTGGAAAAGCCCTCAAGGAACCCCCAAGAGACAGAAAGAAGTGGAAAAACATG
AAAGACAGTGGAAATACCACTTTTGATAAGATTGTCAACATTGCCCAACAGATGTGGCAA
CTGATCTTTAGCCAGAGAATTCTCTGGAACCATTGGAGAGATCCTGGGGACTGCCCAAAC
TGTGGGATGCAATATTGATGGCCACCACCCTCATGAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
GGEVGATSALAPKIGPLGLSPKK-VGDDIAKATGDWKGLRITVKLTIQNRQAQI-EVVPSASALIIKALKEPPRDRKKQKNSAVKHSGNITFDEIVNIAR
GG.V.ATSALAPKI.PLGLSPKK.VGDDIAK.TG.WK.LRI.VKL.I.N.QA...EVV.SASAL..KALKEPPRDRKK.KN...K.SGN.TFD.IVNIA.
Retrocopy
GGAVSATSALAPKISPLGLSPKK\VGDDIAKGTGVWKKLRIMVKLIIHNTQAHM/EVVLSASALTGKALKEPPRDRKKWKN--MKDSGNTTFDKIVNIAQ


Parental protein
QMRHR-SLARELSGTIKEILGTAQSVGCNVDGRHPHD
QM....SLARE.SGTI.EILGTAQ.VGCN.DG.HPHD
Retrocopy
QMWQL\SLAREFSGTIGEILGTAQTVGCNIDGHHPHD


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide