RetrogeneDB ID:
retro_mputfur_595
Organism:
Location:
GL896923.1:15665067-15665293 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
54.43 %
Coverage:
56.62 %
Frameshifts:
2
Stop codons:
1


Parental gene:
Parental gene symbol:
RPL27
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L27 [Source:HGNC Symbol;Acc:10328]

Genomic region (view in browser)





>retro_mputfur_595
AGGACACTTGGTAAGTGGTCAAAGATCAAGTCTTTCATAAAAGATAAATGCAATCACCTC
ATACTCACAAAACACTTTGTGGATATTCTTTTGGATGGAGCTGTTGTCAGCGAGACTATC
TTCTATGACTTGCACTCAAATGCAAGGCCAGAAGGGAGGCAAATTTCAAGCTTGAGGAAA
TAAAAAAAATAGGCAAATCAAATGGTTCTTCCAAAAGCTATGATTT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDP-ALKRKARREAKVKFEERYKTGKN-KWFFQKLRF
....K.SKIKSF.K....NHL..T...VDI.LD..VV....F.D..ALK.KARREA..K.EE....GK..KWFFQKL.F
Retrocopy
RTLGKWSKIKSFIKD-KCNHLILTKHFVDILLDGAVVSETIFYDL/ALKCKARREANFKLEEXXXXGKS/KWFFQKL*F


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide